Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT33003 chr3L 18843606–18845794 (2188 bp) Indy, CR32027 activityactivityactivityactivityactivityactivity
active
brain primordium broad, ventral nerve cord primordium subset, brain broad VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10brain anlage subset2
11-12brain primordium broad4
11-12ventral nerve cord primordium subset3
13-14brain broad3
13-14ventral nerve cord broad3
15-16brain broad2

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0036816Indy4240bp downstream BDGP FlyBase
FBgn0052027CR320277721bp downstream BDGP FlyBase
FBgn0262461mir-31510465bp upstream BDGP FlyBase
FBgn0036817CG686513141bp upstream BDGP FlyBase
FBgn0036818CG1407415719bp upstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

cgtgcaaatattttctagttttgcccgaaaaaaccctaaccatttttttacagttttcgctaaccctcccctcgtttgcaattaaaaaagcaaaaaataagcaaaaaaaatctatagaaaaccgagacctatttgggctcgggttcactgtgcaaaaaggctagatgaggagcgtgattgtgcaatgatcgggaaaacgaaatctgaacttaatgcactctggccggagaaatggaaaaattgcttgattgagtgacagtctatatggagcagcagatgatatatgggtttttcctggcatcttaaggattccatgcaaattaggggttgttatccctgctcccaattcatttgtccctccttcggagtctcaaattagttgcgcatcttgcgatcacatttgtcagggtcgtttggcttctttttacctttttttttaaggttgacaaaagaagggaccaaatcctgtaaaaaatctacgttttttccttttagcaaaggcgcctcttcgaggggaggaagatctgtttgttacctggctggcccctgacattttcccatactccctgcagttcattcacctctcggagcagggatcactgcatcgcagcatcaacatcgaagattatgttccgtctgcggatcagcgaagtaacgactcgaatttacaaaagggttagttcctaagctgttcgaatgcaacacatactgcattaattcgacttggcatgatgagtgtatacgaagtcatctgcgagtcaaatgtataactaagcaccttaatccattatccttatggtaatcattttcatggcaggacgtctaattattctaaagtttaaagcacaaaaaaaggccaacttactttatttttttttttataaataacacgatatgtaagcggttattttagcattaatcatttaaacttacacctttaaatttacttttttgtaacttcttgtgtttgtgaaaatctaaaacacactttcttgtttatacaattgataaaaaaataaagcatgaacccaaaaacatttttccaaattaatatactcaaaactttaagatactagtttggtttattaaattatgatatagaaattgataattttatggtttaaaatctactttatgatcttgacaaaccgtaaatatttatttaaatatttatttattttaatatttatatagagtttccctccccttaaaaataaacataagcttatccaaataattaatgccctttaaaaagatttggttgttgtagcaattaagctatatttaacagtttattgaatatttatgcatggcaaataattaaaggggcgttaatatatgccatttaaatactgatctctgcagcctttcttccatatctttcatcgtggaattaatttaaatttattccaagtggctgccaaagaatttcattcacgcgtttttaaataaccaaatgcaaatgaacgaaattaaaaaaaaaaccgaattttaatttgacagacaggcggcagagaagcaaacaaaacgagaccaaacagaccttcagtacagcgagcaaaggtcctttgaaaaggaagcgcgaagagcaagggaagccaggaacagccagaaatcaaggatacgaaaaagcgcgccaaacgcggaattcttaaaaaacgctcgaaaacaaagagaggatcgaaaatcacagtttgccgtctgggattattgcgcaaggacaacctcatgatgatggaaacgcagatcatgacgctgcgtataatgatgatacgagactctgtttgcacaaattgcaggctcacacacacacacacactggcacacacacacacacacacacacaattggaatcgcaatcgcaatagcaatcgcaatcaaacaatagggagagccaaaggcaacccgttttttaagggttttccattcagcccgccaagggatgaacatcatcctcctgcccctcctgacacctcccccctccccttgcccgaccaaattacgtttcacccctttgtaaaactctaaaaaataaagaggcgagagcgatcgtttcaaacttttttgcagcagccgctgcggatattttaaaaaatacttttcgacgcattcggacggggaattagtcgtgaaaagtgcgtggccggatgagcagcagagctctgaaaactgcaagcaaaccatcttca

PCR verification status

Line verified as correct.

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