Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT33735 chr3L 20284267–20286431 (2164 bp) gogo, CG43890 activityactivityactivityactivityactivityactivity
active
procephalic ectoderm AISN, anterior endoderm AISN, gap VDRC

Annotations

stageannotation termintensity
4-6procephalic ectoderm AISN3
4-6anterior endoderm AISN3
4-6gap3
4-6posterior3
4-6head mesoderm AISN3
7-8procephalic ectoderm anlage3
7-8anterior endoderm anlage3
9-10head subset3
9-10ventral epidermis anlage subset2
11-12stomatogastric nervous system primordium3
13-14stomatogastric nervous system3
15-16ventral nerve cord broad1
15-16brain subset2

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0052227gogooverlapping BDGP FlyBase iFly
FBgn0264482CG4389016bp downstream BDGP FlyBase
FBgn0036964CG64804635bp upstream BDGP FlyBase
FBgn0052226Pex235962bp upstream BDGP FlyBase
FBgn0036967CG65978243bp upstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

tcgatgagctatgaactttcaagtagcaaacttataattttacaagcatatctaaaaggaattttaaaatcgttattaaaaatttatataatttaccgtggaattgtatattaagtttaaaaatttaaaatgtatctatcatttcagttttgctcggcatttaactaacattgcataccattattcatataattcgttggataatatcctcatttcgtttcctgtacatggatccctaggcggcattcggcagggtcatcggatatccttccgctgcaggaactgcagaaaagaacagcatggtcctgacaaatgcaaacaactcgacgaagtgaagccccacggagctgggtaaattgttggcttaacaaattgctaatccactttcaccgggtgctgggatgggggattggatgaggggaaggcatttgaatgcctgtcgaatcctcaaagtggtgggcaatcggagagtcgctttggcatccattcgagactatagccccggaaaaatcccctcttggcgaactttttgcgctcagatcaaagggagcatctgtgtgatatgattaggttgcagttgcacaacaccgagatgcaaactacatgaattacaagtttgtgatttaatcaagattgcatatcgtttaaagcctcatagttgaggtgttgttctagatttgcatgtgaagcaagcggagctggctaaaatatttaaattaaattgcgttccgagaatgtgcactgctttcggcacactcaaaggtcatttcacttggctttcaagaaaattagttttaaattaattaaaagattttcccataactgtgcgctatgtggctcttgatggcgttggagagccgaatgccgagccagaaagaatgctaaaacttggataatcatcccagcaccgcaccgcccacatttccaagtgctggccgacctacccgcaccaccgcccaccgcccaagaactcggttcactttttaatagttcgcaaaccacggagggctatgtgagtttaaacactgttacaaatacttttccggaggcggaatgcgtgcgccactggagttgcgaggcaggcgctatccagaaaactttgcctttcgctcttttttgccgttttcatgtaggccttgagtatttatttgcatttcaacttggcgacggcacagcaatcgcttcagcaaaattaagcacttaaattatgcagacacagtttaattacagttcgcattaggcagtagtaactatataaggaaggattattcccctttccgcctgcggaaatttaaggattttaaggatccaacggaaatggtgcaatatgcaaatatttcaaatccatttagagttaatcaacaaatcgtcttgagtaactggagacaactgacggtcatcgagttactaaataaatatttttgcaagcatttgtatgtttgcatgttggcgttgcgaaaggaaattaacccgtgagaaaggactttggcatacgaggtacttcagaccgccgtcagctgtttacactttcatccccaatattcacagttgcctgccaaagaaagttaccaaaaatccacaaaaaggctggctgactttaccttctaaactctttccttacattttgaagtctagttacccgacattggaaaagttagcgaaacgttacctgttgtggatacatttttagtcccgaaaaaaggtcggttaaaagttttaatgggtattgcttatacggaaaatttggtaatcaaaggaaatacgttttacaccatgtttaagaccctgctacatgtgtatttatatataagatacccattagtttagtttccagtcacttgaatatagggaaagcatatggggaatccctagttataaaggtccgcatggggttgttttccacggctcactcgcttgttgcagtaggattggacggcatggtatggatacaacccccgaggaagtccgccagctctctccaatcgctacctggcccctgattaatttagtctgggtctctcactttgttctgttctgttctgttttcttttccgccaggtacccacagggtataccatgacatgtgttcctccatgaactgggtgtgggtggtggttacttacccaggtagtccagggaaggtggtgcatttctaagcgagtcaa

PCR verification status

Line verified as correct.

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