| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT3380 | chr2L 6700266–6702527 (2261 bp) | Tsp, AkhR |
      active |
head subset, ventral epidermis subset, pharynx | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | posterior endoderm AISN | 2 |
| 7-8 | posterior endoderm anlage | 3 |
| 9-10 | posterior midgut anlage | 3 |
| 11-12 | anterior midgut primordium | 2 |
| 11-12 | posterior midgut primordium | 3 |
| 13-14 | ventral epidermis subset | 3 |
| 15-16 | head subset | 4 |
| 15-16 | ventral epidermis subset | 4 |
| 15-16 | pharynx | 4 |
| 15-16 | trunk epidermis subset | 3 |
| 15-16 | muscle system | 4 |
Whole-slide images
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0031850 | Tsp | overlapping | BDGP FlyBase iFly |
| FBgn0025595 | AkhR | 11020bp upstream | BDGP FlyBase iFly |
| FBgn0031849 | CG11327 | 13555bp downstream | BDGP FlyBase |
| FBgn0028703 | Nhe3 | 15903bp downstream | BDGP FlyBase |
| FBgn0031851 | CG11188 | 17359bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
acatggagcgttatgcgattcttggagaactgcagtgccagggatcggatggtgcttgtctcattgatgttgggtatctcgaagttgcgcgactcggtggctccgttcgcactaatgtccaacgttacccgctgctgtttgcggtccaggaagaaggacatcttgtgcttcagcatcgggaagtcgatcatgaagagtgcttctatggatatgtgcaactttcgacgaggtctaattgatgggaattcatagttttagaataaatagtgttatcgttcgttaattacctaatgtgtcgcgttgatatgaccacatctcctttgcgtataaactgctccagttcagcagaagcaactgcaatgataacatataaataaatcaaattcattctacattcctttctgattttcgtgccctatctcgtttggcattggttgatcagtttcgaaactgttaagaataacttccgttctaccttaaccacacatattgattacaaaataaacagagataatgctcaaatcatcattggtccatgtttgttaatctcttcaagtaaaccccgtcttagccacttgctctgtttgcccacaaacattggcaatcggttatttcgcctgccacagattacagcacctcgaatacggaacatggaactatttattttggtcacccagggagattgtctttaatacccgcggaccgtgttaacccaaataaatacacgatcgctatttgcacaatccgtgtgtatgtaagtgaacgaacaactgtgggtcaaagaatccatcaagacgactctatatagaatttcacgcatttgtgcggttatttgtcatgctgacagcgaccgacttttgacaggctcatgccaggtgaccttcacgacatggatgtggacttgggcataggtatggaaatggacatagttttgggaccggggacacgggcataaaagcctctggctcgtgatcgggctgtaatataaccatctacggagcagggaggtcgccaactcagaaactggtgacccggctgtcagctggcgacgtttgcattgggatttgagtacaatatttacataaatcgccaagttgttaaccaaaagtatggctttcgggcggattttagcatatattggcattgcagctagttgctttgctggccataggaaacgtaaagccatatgtgtacatacactgatcaacacttaggaaccaatttggatatatttttgtaatatacaattggttaaaagttaaaaattatcaatgaatctatctatctatctaagtattttaaagcgaataaactgacttgctttgtatagatatcgtttgagttctgctacctttatgttcataaaccacgcgaattcttcagctgacttattgatacaaccttggcttttctcccagtgcagctgaggaaagagttcgctggaatgcagagcggcgcgataaaggtgcttcggatgcacttacctggatcgagtgagagtgatgcaacatccacaaatgtcagcgccaaggcggtcaacccgattaacagcacgcgcgtccaattcatcgtgttcgttgttgctggtgtcttctgtgatcttcggaagcaatggatgggggtgcgggagtgatggaccgtggggtatgagcgcctcactccaaaatctttaccgtccgctgaaatataaatataaagaaagaaacgataaagtgaagaaaatgggatcccggtcgtcagtcggtggttgtttatttacgtttaaaaataaaacgcattgcgtggaggagcataaaataaaatcgcatcgagtaataaataaaattcaaataaaatttttgtttagcgagaaaagtattaaccgggacagaagtatagcaatcggtaaatattttgcagcatttttgggattctcaacaagcagctcccgcttcacatttttcactccccactttgccggaagtacttggtcgggtatcacctatgtatatagatttagctatagatatttatataggatcccccctatatctttcatctctttggccatctgtgggcgtcatcatcataaagcatttcggagcttaagttttatatttctcgttgtaatttccccgtgtgcccattgtggattccttgagctgctcgagatttatgttggatatttgcaatcattctttatcgtatgcctcttatttaacttaaataaatgtttatttaatgtgtgtgttcagatgtgttttcaggtgcttcttcaacgga
PCR verification status
Line verified as correct.