| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT34268 | chr3L 21338946–21341219 (2273 bp) | CG32436, ebd2 |
      active |
procephalic ectoderm AISN, anterior endoderm AISN, procephalic ectoderm anlage | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | A-P stripes | 2 |
| 4-6 | procephalic ectoderm AISN | 4 |
| 4-6 | anterior endoderm AISN | 3 |
| 7-8 | procephalic ectoderm anlage | 3 |
| 7-8 | ventral nerve cord anlage | 2 |
| 9-10 | ubiquitous | 2 |
| 11-12 | brain primordium subset | 3 |
| 11-12 | ventral nerve cord primordium subset | 3 |
| 13-14 | brain broad | 3 |
| 13-14 | ventral nerve cord broad | 2 |
| 15-16 | brain broad | 3 |
| 15-16 | ventral nerve cord broad | 2 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0052436 | CG32436 | overlapping | BDGP FlyBase |
| FBgn0037076 | ebd2 | overlapping | BDGP FlyBase |
| FBgn0037074 | CG7324 | 2131bp downstream | BDGP FlyBase |
| FBgn0037073 | CG7338 | 7615bp downstream | BDGP FlyBase |
| FBgn0037078 | CG12971 | 9254bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
cgcttgcgcgtcatctcttcgattataatggaggcatctgcctcgcttaaggtggccaactgctgcagcagatcctttttcttatccaagattctacgtatttgggtggcgcagcagtggaacatcttggccagactgttcctagagatgttggtctcgtcatagtaacggattacggcaatcttttcgtagaatgtcaggatgttacgctcattgcgacgggatttgatctaaaatatagagagggaagagtataagattaacctaagattagtattaaatatattttaagcaatttaataaattattagatatctgcaactattagggtacaagccacatttgttgaccacctcttatatcctgtcgaaaatttccatgcagaagtgttactgggcggataagtaattttttctctcagtgtcgtatatatatatatacgtatatttcttttccaataagctctatagaatttgtacatttttatagataatattattgttgtatatgaacatagtgcgaatttggcattacaatgaaaacagaggcctatacgaactgcaacactaagctagccttaagggattaacggcctccgtttcgatcatgcaaagggtgtgcatgtaaaggaccttggttgcaagccacgcagctcaagggtaaatgaatgtacgatatgtgtgcggtatacatgtacatatgtatgcatatgcttgtgtacacgtgtttagtgtaactgccgcgtgtccactcgagacacgttataaaatccaccctcagcgggtcgcttaagggccaagttaacagacatatctggtcccttgtccctttgcgactacttacccctttggtgttgttgttgttgttgcgccgcaacgttgttgttggcagggcggcaatagcagccatttcaatagttgtgttaagtcaattgcaactaggtttctgctctttccgttctccttcttttccttctccacttcttcttttccgataactgcgcagcagcttcttgcgctcttacggctgtagtcgttccgctctcgcgccacttagatcatgcgtcagagggagatagagatgtgttcgtgcgagactcctttttgaagctgttacagagaaaacgtaataaaacagaaataaaagcaatattaatactgttgatgcaaatggctaagcgtttgttagtcactttttacgaaagttggcacggcacgttctcaaattcgctttgcctctgtattagcttttgttgttgcgcctctgacatttttacaattactgagtaataacacacttgtgtgccctgtttctgtttcttggttccgctcttcgtttctctgcgcctgtgtgtgtgtgcgttcagtgcgcgctccgtatgaaataaaaacggttcactatgctcaatcccttttgcatggtgtttgctgttgtagcaacgcagctgttacttttgtacagtgcaggtcaagttactagcgtacttcactagaaagggtattaaaccactagacaatgcttagatgatttgattgtaggaagagattagagctgattctggcaaaccagggaagcaagcagaatattttgggtttcataagtaattatagttggcgaaaacaaaacaatatatacaatttcatatttgtcatattaataacaaatgcagttatcaactgcagaaaggcttaattctagtaataaaacatggcagtttttttatgaattaatattaaggctttcaaatattcaattacagtccttatcctgcaaataccccaaatactttgggaaccctggtaacatcgactacttttaaggcgttaattgttaatttgctgatcttatgtatctagtatatatgtacatatgtatacatgtataaatacatgtctgcacctaaaaagtgaaactctctatttgcccgctgttatgtgcgttgttggtctattgcatcggcagtgggcatggtatgcaaaagcagtgcggttgcagtcgcttcgctcttgtgtcatatgcgtttgcgtttcgccgcgtttgttgtttgttatgtatcaatttttgttgtcggtggaaggagcaggagcgtggcgatgacaggagggggtggcaaggctatatgctgggttaccgattaaagtccgattcctcgtcggattgcccgccgcaaaaacctcgctctatcttggctaattacctttgcgtcacagataagagcctgtctacttttactcttccaacgattcgtttggtggccgaagtgatataagctcg
PCR verification status
Line verified as correct.