| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT35631 | chr3LHet 212650–214727 (2077 bp) | scro, ARY |
      active |
anterior endoderm anlage, epipharynx primordium, epipharynx | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | anterior endoderm AISN | 3 |
| 7-8 | anterior endoderm anlage | 4 |
| 9-10 | anterior endoderm anlage | 4 |
| 11-12 | epipharynx primordium | 4 |
| 11-12 | hypopharynx primordium | 3 |
| 13-14 | epipharynx | 4 |
| 13-14 | hypopharynx | 3 |
| 15-16 | pharynx | 3 |
Whole-slide images
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0028993 | scro | overlapping | BDGP FlyBase |
| FBgn0058064 | ARY | 169979bp downstream | BDGP FlyBase |
| FBgn0085736 | CG40472 | 197812bp upstream | BDGP FlyBase |
| FBgn0085810 | CR41597 | 210662bp downstream | BDGP FlyBase |
| FBgn0058002 | CG40002 | 246936bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
cagatttgtttactggttttgccatctaatgtacatatctaactatgacatgatagtattgggcggtttgcgggcgttattgtggacgtgcccaaaatgtgttactgcaaaagataaaatttaaaacaacaacaaatgaaataaaatataaacattttttttggaaacatctgaaacaaacttgtcttgtgaaactagacctgtttacctgtttatcaacgaatcaagaatatcccttcaatatacgagtaacatggtataaacatttctcaaaagtgatagctttgggcggcttgtaggcgcggtttgactgatagacgttcttagaatctacaacgtcgtattatctcgacgagctctcgaaaattataaagaaaaacggacattaacagatcgaatgagctgatcagaataatatatacatttaacgatcagtaacgcattcttctaccacttacattctgttctagtattaggtgtattaatgaaaccagagtatggtggaacccgacctcaaacatcccagaatcgattattgaaaacaattttttaattaagaattcgaactttgttttttgtatggtattatcgctttaacgatagtacgatggacgaaagtactttttgaaagatctgactgcaacatgaacttgtcacgcagaagaaacaccaaaattgtttttaaaaatattaggcctaatgctttactgctttttaaagtgttaggaaggaacatttgacgtgctttttctttgttgtcataccaaattgttcttaataaataaataaaaaaaatgtattaaatcctcgtctaatgcttaacaaaactgtaccgtttgatctgattctaagttatataaactaattgagttcattgaaagactatgaaaattttcaccataaaaaattaattgcataaaatatgtgttacaagtaatataatttgattttaatttcatttacagcatactagcttaaaatgaatgtaaacgggtaaatcaaggtttgcccgttggtcatgaaaatctttagtagatgaagtgcattttatttttccttggaatcgcttatacacctacatacacaattataaatatatttacagagatctatacaaaaaatatattcatacatacatccaaataaggttatttgtgtttatataccattcaacaataataacctctttgggagtagggtcataaaagcaaaaatcaacaatcatctttccatttcttaagtaaacaatgacaacgaaataattttaaattcaattgctttttccgatcgcctttttacctgaaatagagtataaccctcctagttacactctttagcagcttaaaggaaaatcatttacattttttgaataactgcaaaataacggatatgctgtttgttacttgccagttatttgtttcaacttaatatcgataaaaaattaataaaatcaaaacaatttacaaaagagtggaccttaaagtttttggcagttgtgggcgttgtcaaaatgtgtttggtatatttaagattgatacaggtttttataaaaataatgaatatagaatgctaattagtggtataataatatgtcaaaaaaaataggtcaatcggtcccgtaggcgatataacaattttcttactatttacaaagctactaaaaatagagaaatcactagaaaaaaaagcgacgaactcttttattcctatacgtacatatatcagagacatagttgtggaaatttcaaaatgtattaataatataaacattaatagctacatcatttttgtttgaacattagcgagcaaaaattattttaaattaagactgccgcccttttttgacacgacgtttttacgattcgtttaacagtgttaaaactttcacttttaaattagaatttgaacaaataatagttatatagtttgaacatagttttaaataacagttatatctctgaataatttactcttggttcagggctttaaataaaaacaattatttgttaagtatctcatttcaacaatctcattttttattgtttttaaatttcgaacccgcaattgacgaaaattac
PCR verification status
Line verified as correct.