Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT36267 chr3R 107680–109755 (2075 bp) cpx, CG9766 activityactivityactivityactivityactivityactivity
active
ventral nerve cord subset, ventral nerve cord primordium subset, brain subset VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10not active0
11-12ventral nerve cord primordium subset1
13-14ventral nerve cord subset2
13-14brain subset1
15-16ventral nerve cord subset2

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0041605cpxoverlapping BDGP FlyBase iFly
FBgn0037229CG97664166bp downstream BDGP FlyBase
FBgn0037230CG978010316bp upstream BDGP FlyBase
FBgn0262214mir-92913411bp upstream BDGP FlyBase
FBgn0037228CG109213643bp downstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

cgcacggacacacacagcacactcccgcaccaacacactagagcaagtgcgtgtacatagagggtttgtgtggggcacatatgtgcccgcacgatgtcgatactggctcacattggtagtatttaaaaagcgacgaacggcccgagctcgaaagcacgactgaaaacctaaattgattaagcgaatttgttctatcaagctaattcaattgctcggccagttgactgagtgatccactgcaagcgcagccttatgtaatcggaatcagtgaaaaaagcgaaacacggcggccgccaaaggaatacgactccaggacccgagtcaaatcgaatttgtttgctgcgcgtattacgtaaagtaaaaatcttgtttgcttgtggcacccgcctcctcgaacccctccccactcaaaaaggcacttacgtgcacgctcccataaaagaaaccctaataaagaaatatcgataaaagcaacgaagcaagtggcacgccagcacaataacgacgacgacaagcgaaacatcggtaacaatgcgacccctgggggtgttggtgtgtgtgtctgctatttttaaattagcgccagtcctctaggttcggctcgaccccgccgaaccctgaaacccgtaacccgggagccatataaccctggaagcccagaactctgcactgtgaacaactaaacgacgccttctgtgtctctgtttgtctttcaggaagcctatctgcctaatgcacgctcttcacagtggatttccttagaacaaacacatttcgcgcagactagtcggaactttgctcctcatcaaccaagtccacgcactcacaggaatcttcaagcaaaatctgaaaggaatacttgctgaactaaggccaggtatgtgggtggtccatcaacctaaaaagtgtcgaaagtatgccccaagtatgctccaaacttgctcgcactttatttcaaatatttgtgcaaagtgttcgtccgcatcctgcacattttacgcgtagattgctcgaaggcagcaaaaagttccaagctcattacgcaatcgttcgagtcctcaaaataatgcgaagactatccaaagacgaaacgatcgcagtgctccatagctgcttcgcctgaggcgtatacatgatatacttgaggtatacttacccttttatggccaaggccaaatgcttaggagcgtgggtgcagcgttgggtcggagtcacacacagcttatttgcgtatttattggctttggttttctgactggatcccgtattagaaaactttaaatgtaactggatagccaactgagaagaactttgggtcaacttgaaatgtttagtggcccaaagataagaaggtgttcctgttgcgaccacaccttggccacccgaccataaaattctaagcacgaatgtcataaatttcgcttctatttagctatattaagtcagatagatgtgttagttcgtctcgtttgcaccaaaattccgtgagcccgtgaacttgttttcccgattcattttgcccgaccatctattgcgctgctagatgcgggatggtgggaccgaaatgaattttttactgcacttgccctggtcaataaaatatttagctgtttgctaactaactgcctgtcatagtcttctcgctatcattagccgaggataaaaagaagaaggggaatgaaggcgatattcagacttcaactgacactcttcatttgtccattccgtccatttcgcctcgccacctttcagccctggccaagtggtttgcttgcgcagttagagagaaacaagctgccgcctccagcttaagttcgttaacccaatttgcgcaattattaatatatgggtacaaagagacgatgcagacgcagccagcagcaataagataccctagctgcgtcccagcctggggcgttaataaaattaaaaatttcggctggaagacacgtagaccgcatttattacgggattattgtgctgtaggactaggggttcgagttattagatttgcgaattaagttcagtaccagccagggctgcttggcctgcttgcccctctagcaataaatggca

PCR verification status

Line verified as correct.

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