Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT36302 chr3R 178808–180896 (2088 bp) hkb, CG1090 activityactivityactivityactivityactivityactivity
active
ventral nerve cord anlage subset, ventral nerve cord primordium broad, ventral nerve cord broad VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10ventral nerve cord anlage subset3
11-12ventral nerve cord primordium broad3
11-12brain primordium subset2
13-14brain broad2
13-14ventral nerve cord broad3
15-16head subset2
15-16brain broad2
15-16ventral nerve cord broad2

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0261434hkb6441bp downstream BDGP FlyBase iFly
FBgn0037238CG10906797bp upstream BDGP FlyBase
FBgn0037235CG110313173bp downstream BDGP FlyBase
FBgn0037236Skp213522bp downstream BDGP FlyBase
FBgn0040687CG1464517581bp downstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

gcattttatcacggcattttatctgagggccttacaattgttgagcgtgccaaacattggtttttggattgattgattggcttttggctttcagacagagatgaaaaaatatatataaaaaatgtcgtttttccataaaaattatgattccgaaaaattgattgattacagcgcattgatggcacccaatacagccaacagaacgaatttaaaatagtttgctcgcaagtaatttaatttatattaggtgacagatacatacatttccaacacttgcaaagaaaggagcacacataagataagtttgctacaattaaaaaagctttttcgaaaacttttgttttatttacgcgctcggatagtacaatactttaaaataattgcgaagacaactggtggtttttaacttacccaataaacactgatattaaaatatatggttttacttgtgcacttcaatccatttgtaaccttgtcgcttcccgccccttatacccaccagatccttgagacccattgtgatatgcgactgtccaaaaaccgcaaaaactactataaatgggcatcataaatttaaattacttccacccttcttcacctaggcgctaccagcctaagcccaaatccagccccagggtttgcagactcttgccattagggggttgaacctggggttgaaaccatggcgaaatgtcgctgtggcagggtgagaatgagagcgaagagaaccgaatgagcaaaaagggcgagaacgaagccatcaacacgattatttcgcataaaataaattgattctggctaagagtcaagtcgagcatcgcctttgagcccgaatgaagaggaacagatccgatcgagaacaaaatagacagaaagaacaaaaactgcgcttgaaatatgtcgaaatttgtccacaataagtgttttattgaatcggcatacacaaaggattgcctcatccccgatcccgaattcatcgccgctataaaccacggcccagccactcgatgaggcaaagtgaacaatgccggcgaacaatggactcggcgacggcgaaagtagtggcacgtcttcgagaagcggagggccagcgacgacaccttcggctgacaccttcccctggatttctgaatagaaagtgggatatgaataatgacaagcgagccaatttcgggtagttacgtcaaaaaagagtcaactcggattcttttctccattatgacggtggcgtctttgtctcggattgaatggattgaatgtggcacctttggcagccgcttagggagacacgactcctgcggtgatgtggctagcccctcccctcccgtcccgttcccgatgccgatcttatgcttctgtggcagacattgggtcgccgcttaaattgagcgtgcgcaatcgatttggtgccgcattttagtcaccgaatttgtatttagtttaaaacctaatacgaaggtgtgcgacgcgtgaagtatgctatcatgcgagagtcattaactcatattttttattcattctaaacgccgcctttaaatgagtgataaagtgctcccagttttatacacccaagcttacatatattaacgtgtatattgtcagtgtgacaccttctttaaataaacaaaagaccaaagactcaaggataacattgctaagctattgtagattttcgtatcatgatttttatacctgttccttgctaagtaaaaggttttcaacaaagtctaaatgctcacatcagctcacgaatgctgcgaccacacatttcaaattttatttgttcttaaataaattcattattcgctttgcatatttctatcgatcccactgtaacgcgcataagttgcaaatacagtcgcacgcccaacgttttcaaatgtaaagattttttctttcgatgtgtaagaatgtttggttttctacgtcttacttctacctgtatccgatagtcgaggatttcttgtttaagctttttgttagtaatatgcattagtaacatttagttagtattcattcagaatttagctttgaattttactctgggcaccatacatataaattaacagacaacgattttgcgtattgc

PCR verification status

Line verified as correct.

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