Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT36347 chr3R 276935–279086 (2151 bp) CG31522, CR43629 activityactivityactivityactivityactivityactivity
active
ubiquitous, head epidermis subset, trunk epidermis subset VDRC

Annotations

stageannotation termintensity
4-6posterior endoderm AISN2
4-6anterior endoderm AISN2
7-8posterior endoderm anlage3
7-8anterior endoderm anlage3
9-10anterior midgut anlage2
9-10posterior midgut anlage1
11-12anterior midgut primordium2
11-12posterior midgut primordium2
13-14midgut broad3
15-16midgut broad3
15-16ubiquitous5
15-16head epidermis subset5
15-16trunk epidermis subset5

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0051522CG31522overlapping BDGP FlyBase
FBgn0263620CR436291725bp upstream BDGP FlyBase
FBgn0037252CG146509886bp downstream BDGP FlyBase
FBgn0037251CG980413885bp downstream BDGP FlyBase
FBgn0264983CR4413413980bp downstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

agtcgaactgcaccctcttcccttgtaattggttgtggaattgggatgtgcagtgggattgggattgggattgggaaagccagcaagccttccgatcgaaaagcagccaacaggtgcgctgtcgcaagaacggagcggatttggatgaggcaagggccgccgcttgatcatgatcgatttcagtggcaggtgatggcttgaataccaaatcaaagctccgcactcgtcgatcaattaattattacggcatttcacacatactcgcaccgggacggactgggttttttatggctttcgggttttcatttcacgtttcgctttttttgttggctcttagctcttagctcttagcttttgccttttggcttttggttttttgtttttgggacttttgcgctcaaaatcgaattcatggtcaaactgtttacgaatgtgtgtcgccaaaaagaagctacagcagcaagcagcgagcagcgcggtaacgaaaggcggcgaacaacaacaggttgacctgatgaaatggaaattgaaacgcgttttacgtcttgacgcaataatctatttcggcctttgttgcttattgggtcacccaacggagaaaaatggcattttcgtaatcgaagccctctgctttctaagggcggcccacacagcccgcgcaaatattcaaacagtcagtgggacctccataaccgaattttcctattttccacctccaacaagagacggttgccacagttagccaagcttccaaactaaattcagaaaaacactcgcctgagccagatgaatgcaacctattatgactaattggattgatccatctcaatataagcaacttgggcaataaaatggcaagacaaacaatacaaaatatagcaaatgcaaagcggggaaatataaacaaatataacttgacatcgcacaaaaccatggtacctacatacatatgtatccatgtacatatgatcatacaaaatatttgtgtacttttcgctatttttttattgctaacgtggttccaaaattccctatcaaaacgcccttaaaacaaatttcaaaacaatatggctcatcaattcgaaatgcctcgaatccagtgggcgttatgttagttagttatgacggttccaacatagatcgcttgcactgcagatgctcgtgggccgcgcatttcacgagggaggtgggaggtgggcgatgctggcagtgggcgggacgagtgtatccgcttagctaatggattcgaaggcggccggacgccgcggcggtgacttgttgaggggtcactttctctgctgctctctctctctctctgcacgtttacaaccgctctcttccgattcctctccgaataagaaagagtgggagacaatgctgttggatgcgagtgcgagcggaacgtctcggaattatgtcatatctttacacacatgtgttacaacaacgtgacgaactcggcggctcggactttccgtatgtggtatctaatagtttctggtttcggttctggccgggtgcttcctaatctgggatggtctcttatcgctctttattagttgattagatggccgtgcctgcggaaaatgcagacgggttcgcaggtaaaggtaactgataaatggaagagggggcaacacgttggtattttttttttattttttagttgaggcactcgacacagttggacccatagcatttgaaaatccggtcggcacacctattgggagcacggaatacggggggaaggctttaactgattccgcctgattccaaggctgatttatcaaggcgggcgggaacaggcacggccagcttttcggggtggaagacgctactcggcgacgttacgttggtcccacagcgcgataccgacacaaggaactgggcgcaccaaaaaacacttcactagaaaaccaaagacaggcacccaaatcgaatcgattcgaatcacaatctataacggaataacactttactttgagttcgttttgcagtggtagtactcggcagcagactaggaattttgtgtggaaatcgctctggcctgacccaaaaagcgaaccagacgaggaggcacaacccaaagcgaaatgcgaactgagacccgctgctgctgcccgctggcaaagagcgagagaaccccgaaacg

PCR verification status

Line verified as correct.

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