| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT36575 | chr3R 736192–738402 (2210 bp) | Cdep, Gnf1 |
      active |
anterior midgut anlage, ubiquitous, posterior endoderm anlage | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | ubiquitous | 3 |
| 7-8 | ubiquitous | 3 |
| 7-8 | posterior endoderm anlage | 3 |
| 7-8 | anterior endoderm anlage | 3 |
| 9-10 | ubiquitous | 2 |
| 9-10 | anterior midgut anlage | 4 |
| 9-10 | posterior midgut anlage | 3 |
| 9-10 | trunk mesoderm anlage | 2 |
| 11-12 | anterior midgut primordium | 3 |
| 11-12 | posterior midgut primordium | 3 |
| 13-14 | amnioserosa | 3 |
| 13-14 | ubiquitous | 2 |
| 13-14 | midgut subset | 3 |
| 15-16 | midgut chamber | 3 |
| 15-16 | ubiquitous | 3 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0265082 | Cdep | 82bp upstream | BDGP FlyBase |
| FBgn0004913 | Gnf1 | 390bp downstream | BDGP FlyBase |
| FBgn0020280 | laf | 31938bp downstream | BDGP FlyBase |
| FBgn0004183 | snRNA:U1:82Eb | 37463bp upstream | BDGP FlyBase |
| FBgn0004436 | UbcD6 | 38285bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
tgatgttgcgaagcacaatcgataatgcagcaatcgatgtttcggcagccctgctatctcgtggtagcgccaaagagtatcgtatctgagttttttccccgatgtcaacgcgaacggatgcacgtactgggcagcggaaaatgcagtgaaaattgccagaaaagtcaggggacagcatgtgcgggcaaattcaagcgaagcattcgattaactgccagagtgcgcgatccacttgattttccgggaatacctgccacgttcgacgggtttcgcgttctatatttttcgcactgaaaattctcggcttacgcgcgcctgtgtgtgtgggagtgtgtatctgtgtatccgtgtaaagggcgcagctcggcgaaaaacaacacccataaatgagcgaagccagcctggcgtcgcgcttttaatcaaattaaaattaattgtagttcaaagcgtcgaactcgtccgcttttttttgttttttgcgcaactctctgaaaattcaataagcacgtaaattccagcacacacacaacgacttcaaccgcgcacacacacagatacaacgctgccgagctgggcgagcgaacgcgagagcgagagcgagcgcgcgatagagcaggcaagtgcagactccgattccctcccacaccccctgcccaagcacccaccccattgctgttgttgttgggccaggccaggccagtcacaaggacactctcagcctcccagctcacgcatacatgctcacgcccgagagccagggttttgcgctcctctccccttcccattccccttgcgctcggtaaacaggtgccgcgccttgtaccgttactttgcctgccttcggagggcttcgtgctgcgtgttttggctacacatgtttacctttcagcactcgcccaaacgtcattgcagtgagtgtgaatccatccaggggtcaagtggggggagtgttgtgaatgagggattcgaataaacgaattttccagctcatagctgtcgccaatactcctttcacgcagcatgcaaattgagatttactcataatgtatttttcgcccacaagccatttgtcataaaaacggtaaagaatatgaatgtgattttaggtttatcacatttcgatagaacttatgatgccacttgtaagataggatatgctataacatccaatttggatgtaaagatagcgttttttttttttatacgggaaaagaggaagaatggctctgaaatgcttattttgctcccagtcgaagtacacattgtccacctattaatatattcaagctgaatacaatttccttgctttttcgcctttcgcctttcatcttacccgcatcctgcctcatttttatcgcccttttcacatttctctgcacacagcgctccatattcaggtcattgcatttgttcgacgttccaccccatcgaaacaccacccacttctcgcccttccccacgccccctctgacacattatgctgcgatcgtcctgcgtgtgaatgtttacttttcaatagatttcgctttcgttcactcgaaagtctgtcagtggacaagttcttgttattttccgcctcatcggcggaccctgcatttttatcggctcatgaggtcagcgcatttttctgtgccatgggacgtatctctatttgcatagtgacgaaactcttcaataataaactccgcaaaaagaccgaaactgatatcagagaccttccgataaatggtttgcgataaggcagaacaaggaacacagttacagctgggcacccctaacgggttcagtatctttatccagactgcaaaaacaatagccagaaatgaaatagatacaccatgggtgtacatgggtgaaagacagttgttcttgcgtaagacgacctctgttcatattttggttgaatgcgaggtctgtctgtaaaaatatagtatagttcgacatacaggaggtttcactgtacaccacacatatgcagcactctgtttacaccgcttcttatcagcagaacgcggtgtgtgtgggagaaccgcttggggcgggctagcggcacagataagccaacgccgacaacacacttgactgaagagagcggaaccgaagctgtcaaaatacccgtttgttagcaagctggtcgttgagtttttggctagtcaacagcccttctgacatcatcattggggctcttttaggatggatcaaagtcccggc
PCR verification status
Line verified as correct.