| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT36980 | chr3R 1546647–1548740 (2093 bp) | CR44924, cas |
      active |
procephalic ectoderm AISN, procephalic ectoderm anlage, ventral nerve cord anlage subset | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | procephalic ectoderm AISN | 3 |
| 7-8 | procephalic ectoderm anlage | 3 |
| 9-10 | brain anlage subset | 2 |
| 9-10 | ventral nerve cord anlage subset | 3 |
| 11-12 | brain primordium subset | 2 |
| 11-12 | ventral nerve cord primordium subset | 3 |
| 13-14 | ventral nerve cord subset | 3 |
| 13-14 | brain subset | 3 |
| 15-16 | ventral nerve cord subset | 2 |
| 15-16 | brain subset | 2 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0266229 | CR44924 | 3122bp upstream | BDGP FlyBase |
| FBgn0004878 | cas | 4121bp downstream | BDGP FlyBase iFly |
| FBgn0261261 | plx | 8089bp downstream | BDGP FlyBase iFly |
| FBgn0037368 | CG1239 | 12588bp upstream | BDGP FlyBase |
| FBgn0037369 | CG2100 | 13773bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
ttttcacttgtgtcgccattgtcctcgcaaatccacacacgtgtccacttggattgtgaattgccagaaataaacattcatctcgactccggtatctgcaagtttattagcatgaaaccatcccatcagcgtgcattttccaagggtcagaaatcttcaacaagcagagagtaactcaaatatgcattcgaaatccgaaggtaaggaacatctccgggggtagaagttaagatgctgaaatatcttaggcaataaatctgtggcttaacgcatcccaaaacagaggctctgaaaaaggaagaaaatacggaaaatattctttattcctgaaggaaaataggtaaatagggtgtgcatgcccactgaagagcccctcggattgaatattcaaaggcctaatgtttactttttagcataaatcgtgaaaattgggaaaaaggacaaagaaatcgaagtgccacaggcaattggcgtaattagacagatagatgtgagatatcttctccgctcaaattgttctcgaggattttctcacgttgataatttgctcctctgtacagtaactgctcctgtagacggacttcaatagcaattaaatccccataacgactgttcagtctgtgacaagcccttcagttggctaattgatttgccagtgtaatgctaatgccaaagttacaatatttgccgcttcatggaatcaggacccgatcctctgaactcgtcctgcgataactccaatcaactgagctggccagcaacaacacttaacaaaggcgactaacaaaagttttctatttcgaaacatttgtaactgaatatgaaattgtcatatgtaaattccagatccaaatgcaaaagcataaacgcgaagtaagactgtgaatgaacctaaatgtatgggcttttgttcgcattttcatgcagatttccgtactccgttgccattttacaatgtggcatggaaccttttctgtaatctattgctccgaactcggtttacttcgctctctgctctggctgctttatccatgtcactcaattatggcaacaattggtaaatccacttcaatccccattcgccaaccaagtgacaaaccatgtcctggcctgatcctgccgcctctcttctcactatacattgcccattccgagcagaaatgcaaatgcaaattcaaaatcaatcgatttgttcgatgtcggcggaccatcctcctcgaagtgatttgcataagtttccagattgcgcgcgtgcgcagacccgaatctgtaaagtataccctcctcttggtggaaagtgcaggtctattagcataaccctgtgttctgggtgctgagtttgaatttgggagtttcctgcctcagtggagaagtcgcctgtgccaaaattatgcaaatatttgttaaatgcgttttaggcatcaggtcgctccacatggtagaaatttgcataatttattaatggtattaaccctcggagggttgcaggcaaatagtcgttatttttttttgctggcagctgatttctgcgattgatttaatgaacttttgcacattttcgcaggcgaaaggtaatcgaaaactccggctcaagatttttacgctttttattgggaaataaaggagagaaacttaggcgataatttatcaaaaatatgtgtcctttcagcagctgtccgagttgattgatgattgttatgagaatccttaagttgtctccaagattgctggaaaatcattagcgatgactcaagttacagatcgcagagaattctcacgcgtttttccgggtttttgagtataaaaagtttcctttttcggagggttaatcccgaaaactaatgacaatattaaaattaatgaaaccgggcgacgttataagatactttgcgtggcatcctgcaaatatttaccctttttcctggcgaaatgctgcctaaatgtgcgaaacttaggtaagaaattttccaatttctctaattgcagggaaaagggttcggtttccaaggactttcttccaagtttcgttttccgcaatttttgcaacccccgaagaaggtcctttcactgcgaaaccaagccacggggtcagct
PCR verification status
Line verified as correct.