Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT36981 chr3R 1548317–1550493 (2176 bp) CR44924, cas activityactivityactivityactivityactivityactivity
active
brain primordium subset, brain subset, brain anlage subset VDRC

Annotations

stageannotation termintensity
4-6procephalic ectoderm AISN2
7-8not active0
9-10brain anlage subset3
9-10ventral nerve cord anlage subset2
11-12brain primordium subset4
11-12ventral nerve cord primordium subset3
13-14brain subset4
15-16brain subset4

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0266229CR449241452bp upstream BDGP FlyBase
FBgn0004878cas5791bp downstream BDGP FlyBase iFly
FBgn0261261plx9759bp downstream BDGP FlyBase iFly
FBgn0037368CG123910918bp upstream BDGP FlyBase
FBgn0037369CG210012103bp upstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

agctgtccgagttgattgatgattgttatgagaatccttaagttgtctccaagattgctggaaaatcattagcgatgactcaagttacagatcgcagagaattctcacgcgtttttccgggtttttgagtataaaaagtttcctttttcggagggttaatcccgaaaactaatgacaatattaaaattaatgaaaccgggcgacgttataagatactttgcgtggcatcctgcaaatatttaccctttttcctggcgaaatgctgcctaaatgtgcgaaacttaggtaagaaattttccaatttctctaattgcagggaaaagggttcggtttccaaggactttcttccaagtttcgttttccgcaatttttgcaacccccgaagaaggtcctttcactgcgaaaccaagccacggggtcagctgccaaagttccctgaactctagagcgcgaaaagcagagagaaatggagagtcagaaaaggaaaaccaagaccaaaaggagaaatatggaattataatcttattacatcgtcacaacaaacagaacagcagcggcacccccctcggattgttatcctttgggcatccttcgatcgtctcagctgcctccagggaatcccttcatcttcacgaccatggatgcctggaaactgcgcaccggccggagatacgccggcatttgtcctggattcgctttcttgcagcacaatcccacaatcctttcaaacgcacagcacaaggcacacacacaatgcgacgtgtccttacaaaaaggattacgcagcatgcttacacaaatgctgtggagggaacatcttgttatgtgctccgagttcaacatcatcctcatcgtaatcatcatcatcatcaacgccatcggattgagggtggatgctcgattgctttcctcgtatccttttctcactattttattttatttttttttgcattttccgtcccatttcaggtcgtgttttgtggaaaacactccgacgcagttgtgcgttttgttcgatcttcggttttggcagttgcgcaatgaggcgaacaacgccaacacagttccagggaacaggatcagaggtaggatcaggatcgaaatcgggatcggaatcggtatcggtatagggatatcatgatcaaagcacgtttgcagcttgattgggttttcattgtcaacaactgggcggtccttgagcagcagtagagtcgcagcagtgcggataggaaaaaggattgaaataccaattaaacgtagctgcggattttattttcatcaaaactcggttcaacgacatatggtacagaggtagtgcacttcacttcagattgacctatataccaaacaataacttggtgcaccctcccatttagttcccaaaataatcaagatctacacaaatacatatatgctgcaaatatacagcaaatacaagagctgcaaagaaaattagacggaaaatatgaaattaaaaaagttgcctgggtgtttatctcaaaccctgagactttaaattcaaaccctgtagacattttggagtacttaagtttttaacacaaagaattaaaactttatcttattcaactagttcaaaaaggacttgcatatttattgaacttttacgatttcgtagattttcgcattatttgcttagctcatttccataaaatgccgactagctgtctgacctccacatgtcaacacaactcattaagttgcaatcagtgttgcacccttcggtttgtccgacttccggatattaactgtgaactaatgacttgcaaattttatgcaaattgggtgtcaaatgatggcgtcgaagggggacgaaccgagaatgtcgtgttatatgacaatttaatcgctcactccttccggaaactttggacatgtaccactcccaagattatggtaagaaagtattttaaggaatatgggaaagttgttaaacctaagtactatttaagatcgaggaagcctaagcaaataccgctgtcccagttttgattaatatttgtttggacagtcaagaggaagaattgctcacccaggggaaaacccaccccgatcccattattctggctttgccaatttttcgcaaaggaaaattaaaggaaaataagcatcaggcaggaggagagaaaaaggctaagggaataggtagaatcgcagga

PCR verification status

Line verified as correct.

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