| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT37466 | chr3R 2488662–2490888 (2226 bp) | lab, agt |
      active |
anterior endoderm AISN, head mesoderm AISN, procephalic ectoderm anlage | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | A-P stripes | 2 |
| 4-6 | anterior endoderm AISN | 3 |
| 4-6 | anterior | 2 |
| 4-6 | head mesoderm AISN | 3 |
| 7-8 | procephalic ectoderm anlage | 3 |
| 7-8 | hypopharynx anlage | 3 |
| 9-10 | posterior midgut anlage | 2 |
| 11-12 | ventral nerve cord primordium subset | 1 |
| 11-12 | posterior midgut primordium | 2 |
| 13-14 | midgut subset | 3 |
| 15-16 | midgut chamber | 3 |
Whole-slide images
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0002522 | lab | overlapping | BDGP FlyBase iFly |
| FBgn0024912 | agt | 2841bp downstream | BDGP FlyBase |
| FBgn0262801 | twr | 3499bp downstream | BDGP FlyBase |
| FBgn0026566 | CG1307 | 5159bp downstream | BDGP FlyBase |
| FBgn0010355 | Taf1 | 6893bp downstream | BDGP FlyBase iFly |
UCSC snapshot
Sequence
ctggtagtcgtgcatgctggcgattccactggcaggtagtttcggtgctggaaggtaagaaagagggttgtcaagcacactgtgcaaaatttgtaccataaagctattaaatggaaatagatattcagttgagagtaatgcactaaggggtaagatcaatcaaggaatagttttccttttttaactcggcagaatgtatcaagctattaagtaaatcatctaaaaatgtaatactagatcttacaatcgtttatcaaactttagtactgttagtttataatatcctgaacacaatacgagtatattattttcttccgtgtaatattgagttttgtcctcttctttgttgtggttccatggccaaggtagtgaggttcaggttaggaggccgatccctaacgctgatccttagctgtcgcagctaatcattgtgagagttcaaatcctcgccagctcatctaccccaagtcgctctccctccctctagccaagaactctctcctttccgtttgacttttggcttgtttgcgtgattttgcattttattcataatttgacatgcgccccgtggctaagccgacgatgatgaaaataattccttttggccgtttgcttttccatagaaggatttaatgcgctcaataggtttgtttgaaaatattgggattatcctgacagcgggcattcggttgcttgtgtatctctggatctgtgattctgatattagctctctcttcgattcgtaggcgggtcaagaatgattatatttgtaggttcgcctcggacctgagaccctatgataccccggaaatttggtcttgactcgttgggaaagcggataattgcaagttcttaaaaatcttttctgttttataaacgaaatgcgctatataagaaggttatggaaaatttaaagaatagattacgtgcaactaaactagcttatataaaacgtttaagcttgtggcttaatttatggagtgtggtgtggtggggtacataaatcgttggccctggaagctcataaaaaaccttttagcacaatcataaatcttaaggaacttttctatagcaccatccaattaatggtcattatgcgaccatcacccaccaacctcgagggtttcctcatgctacgatgatgatgatgacgacgatcaagtcaaaaggtgccgattggtggccatattagtatggaatgcccgatcccgtttagttatcgagttggcttaacagtttttagtcaattggccgctgcgagtgctataaatcaaaccagaagccacgggcaataaatacattttactgggctggccgaatgagtgatgaatttatgactgctcctccgagtgctaccggcacccaaattggcatccagtcgcagtatccgcacagtagctcgcacgcacctttcggggatttgggagctgtttgcggatcgatcgataagtgcccagcccggtccggctggaaactcgaactcgaactcgaactgggctctacacatctcctatcgtaatgcaaacaggaatgtctaagaaaacaagccccaggattaccgtgccgagtggcttgggctgcatttgaatttcccgctcgcgggcaaacaaactaagcaaacacagtcacagtcacaatcataatcaccatccacattcacattcacattcgcattcacatcacggtagcagtaacagcagcacagactgtgacagttgcgagttactactgcattccggttaggctgtcaatatgccgccgccaatcgccgcacagtggtgtgggagtggttagtaagttattcatggatgtgaagttttggggcatgcaaatctattccttctccttgcttccacgagcgcgtgtgacaagatggataaatgggagtgatgcagaagttctcttccttcgaggaaaaacttatacctttgatgcttttttattaccacttaaattacgaacattatttggttattttctcagcttttcttgagaagcatgtgcgcttgagatgcttattgtagtgattaacaagttgtaataaaatgcagatatatatgtaatatatattatatgtgtacactttataaaattatttttttatttatttattttttttgtcagaaatcctacagttatcgaagctagcatttcaccttttactttattcttaaacttaagcgtaaaaccccaagtcttgtccccttcgcatctcctgcttcactgt
PCR verification status
Line verified as correct.