| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT37520 | chr3R 2599634–2601734 (2100 bp) | CR42721, mir-993 |
      active |
A-P stripes, pair rule, ventral nerve cord anlage subset | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | A-P stripes | 3 |
| 4-6 | pair rule | 3 |
| 7-8 | A-P stripes | 3 |
| 9-10 | brain anlage subset | 1 |
| 9-10 | ventral nerve cord anlage subset | 3 |
| 11-12 | ventral nerve cord primordium subset | 3 |
| 13-14 | ventral nerve cord subset | 3 |
| 15-16 | ventral nerve cord subset | 2 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0261638 | CR42721 | overlapping | BDGP FlyBase |
| FBgn0262174 | mir-993 | 2421bp upstream | BDGP FlyBase |
| FBgn0263383 | CR43435 | 4205bp upstream | BDGP FlyBase |
| FBgn0266235 | CR44930 | 7204bp downstream | BDGP FlyBase |
| FBgn0000071 | Ama | 8652bp downstream | BDGP FlyBase iFly |
UCSC snapshot
Sequence
ctggatgctggaaaagcgggagaagcaaacatcaaatgcgagtgctcagtgcagcgcacaaattgaaaacaaatggcacaggccctgcacagaattattttgcctcgttttccttcgttttttatgcctcaccaaattcctcgctcgaatttcaacgctctttcttggccaggcttttattaagtactttttttttggcacgttccgcaccatgcttctatggaaaattaaacggcggaactgtaaaaattcgggagcaattctcaaggaacaagcaagaaaatatcgttaaatattgaaatactgtaattggtaaattttaggtaatgatctttagagttatctatctacttcaccacaaagtcatggaatctgccagtcagcgtctttaactatcagactaaaactgatatataacataccaataaccttatttttaatatttttaaagttactttgctttcatttcacttaagtgcaccaccttttgggcaccccagtcagtccgttgatattagttcatattgcggccttttttgcctgcgtcgaaacgcgcccattagagaggtacgtggtccaaaccgctttggccataactcacagcgaatgaccttctggtgcagtcgaaaaaagccggaaagggtcagaggacgaagtgcggggccgaacggaatgtgtataagggatgggaactggcagaccttttaattccagtacaaggatgcaacaccaccgaaaaaacagagaacgaaggaaagaaatatgaggaccgggaagaagtgggtaaggattccgagctcgttgggcattttaaccgattgccgggccatgataaatcgtggaactaatttaattaaagtttacgacaactcaggccaagtccctgacttcttggcagcaatgcaatgccactgcagactgcagttgcagatacattgcacgataaagggattcaattatggaaatacacattttatgcaggtgaattctacgagaacgactaataaaatgggaaatcgtaaagttaaaagagcaattttctacaccgataaaagagcagagaatgaaagcatttaaatattctaaatttgaatagctgattgtatgttttttatctttagagagatgcgttaaatgcaaagtggactttgaataaaatatgttgtttcaatgaaaataaaacggatcggaatgttccaaatgaaataacaaagttgcatagttaagtaaatattaattaaagtgggtcgagaactgcaagcagctgcaacgccccaagaatttatattaaattggtttgtctacatccgcaatgcacccaagaccgaaaatgccatctcacgggagatatcataaagtgtatgcctttcagctggctgtgatttatgcgccgaggttgcaattaatgaaactaactatcgtgtatgttgtaatctgaatctgaaaacaatttggccaggacattccattgtccttccattaatttatggtgttgcggcggacacatgtgagcaaacggcttttagctgcctgtttttaatgctgcgcacagtggcaacggcaaaaagggacataattaacgcaaatacatatgtttttatgaggaatatgcatcagatagtagattatatagactcgcagttctgttattgttatggtggggccaaagccaaagcacattatgcacacttcgcccgtcgtcataaataaacgcaattttgctgtaaattacagattaaaatgctagctaaaatggagcagggcgtggcaagcggaagtttgggccgccctggatctgaagacataaataacaagttcattttcatttaattgcacatttgcgcacacaaaatcgtaaattgcagggccagcgtagatacgaattcgaaattatgatttctgcttataaagtttgtgcaaacctttcctccttccaggacgcacggccgtaaggacgccagtgaagccccacaatatcctggaacgggttaagaatgcaaacaaatttaaatattaaatgcgatgcgagcggtggacaaaggtaactattcagaggtgaatgttgctgctcggcagtgggtttgtttggtgtccttccagg
PCR verification status
Line verified as correct.