Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT37524 chr3R 2606594–2608728 (2134 bp) CR42721, CR43435 activityactivityactivityactivityactivityactivity
active
ventral nerve cord anlage subset, anterior ventral nerve cord broad, ventral nerve cord subset VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10ventral nerve cord anlage subset3
11-12brain primordium subset1
11-12ventral nerve cord primordium subset1
11-12anterior ventral nerve cord broad3
13-14ventral nerve cord subset3
13-14brain broad2
15-16ventral nerve cord subset2
15-16brain subset2
15-16anterior ventral nerve cord subset3

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0261638CR427211145bp downstream BDGP FlyBase
FBgn0263383CR434351921bp downstream BDGP FlyBase
FBgn0262174mir-9934422bp downstream BDGP FlyBase
FBgn0000439Dfd10964bp upstream BDGP FlyBase iFly
FBgn0266235CR4493014164bp downstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

tgaaggtttctacgcaactcgccttttaaatgtttcagttcttcctcttctggacttatttcgttatgctgatgccattgcccacgctgtccgccgttttgggccatccttctgcgctttacggatacgaagaagagaattttaaaattgccggtaggtagagaaagggaatgaatgtcgaatgtcgagtcgagtcatttttctagttttaagacgctaaactcgacactttaaacaccaagacccgcccctaaaaattagcaaatggccggcccaaataaggaactacactccaacaaataagtatgtaaattaacaaaaactatcttaatagttataacaaactaaactataataattgccaataaatatattaagcttatttttaaatacataaaaacacaagatatttaaacaccaatttataatattggtcatatatagaataagaattgaataaatatagaattcgaattgaataaattaattcgataaagaatttatattgccatttcgttacagttgacattgatgtttgcttcgctctcacaggaatggccactgcccacagtctgctgatgtttgtggaatgccaaactgatttactttagtgaaactccccgtcacacaggacaaatgtcacgtcggaaaccatccccgaactttccacaaatacaatcccctatgaaaagctctcaacagctgcctaagctgctaataacgaatggacacaggccaggaattggtcagtgcggatgtgggtgtctcctttacccaagtcccttttaattacttggaatatcaacactttgtcaaagtgcgctattcattaaggtgtctgtgggtggcttttcgaatagggtggccattagcccacaccgccccagcagaccaattccatctctccattttaattgtcactatcctgcgcctcagaattcaatgagggttgtgtggctcgcacgtgtgaaatgacctgtgataattactttctttctcttcttttattcatgagaagcactcagctaaaatttgttttcgtttaatggtttttctttgagaagtcgcaaagttgaggggctgactgacctaaatttggtttgctaatgagcgcggaaaaagggagcctggaattagccattgaaaataagttccctaaattgcatttgattttttttaaatgcttagtcagaggatagtatgaaaatctggacaatgcaaatacatttctatatacactacgttcattgaaaagtatgtccaaggtagaatgaactatataccaccacaccgtataaagcatatatagatattctggaccaggatcactagcctagtccatctggccatgtccgtggccacgtcgagaactatacaagctagaaagatgtttagattaaggattcataggacataggcaaagagcaagtttgtcttctgattttaaggctaaatgttaaaaattttttttgtatacaaaaaacaaaactgttacgctctattgatttttatacaaatccaaatcgatgtaccgaaattctgaattcgctaattcacgatcccactagctgagaactcgacgattgcgttctatcttgctggttgtaaaaatggcagtaactttagaacacacacaaatgtattaagttttaaaaggactgtacaagtatgaattgggattgcgaacaaaattgatgtattttggcgtaagccattgcaaattagttttggtgtgtattttttctaaatcatgattattttcacggtactcttcgccgcatatgatatatgttatacgtgtcgtttcgaattgaggattctgtcggtactctcaaactaggttatttcctcttgaaaactcactttacgcaaaattggactagcagcatagtcattacatcggacccacgagaactgctgctgcctgccgcaaaaatagaatagaagcgacgaagacgaggcggattatgtgcccaagtgtaactaaagagaataagggcgaaaatcaacgaatcattaatcaatcctttcatgatgtgacgcggtgcgtgtccttttatgtgtcaaaaaaaagaagaaaaaacaccgagtgagagaaagaaataaaataaaacagtgggggaaatgaaaaccgg

PCR verification status

Line verified as correct.

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