| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT37540 | chr3R 2634881–2637078 (2197 bp) | CR42651, mir-10 |
      active |
midgut interstitial cell, ventral nerve cord primordium broad, ventral nerve cord broad | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | trunk mesoderm AISN subset | 1 |
| 7-8 | not active | 0 |
| 9-10 | ventral nerve cord anlage broad | 2 |
| 11-12 | ventral nerve cord primordium broad | 3 |
| 11-12 | interstitial cells primordium | 2 |
| 13-14 | brain broad | 1 |
| 13-14 | ventral nerve cord broad | 3 |
| 13-14 | midgut interstitial cell | 4 |
| 15-16 | midgut interstitial cell | 4 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0261503 | CR42651 | overlapping | BDGP FlyBase |
| FBgn0262424 | mir-10 | 347bp upstream | BDGP FlyBase |
| FBgn0000439 | Dfd | 6732bp downstream | BDGP FlyBase iFly |
| FBgn0051485 | tRNA:CR31485:Psi | 10107bp upstream | BDGP FlyBase |
| FBgn0026162 | tRNA:K5:84ABd | 10735bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
tggtaagcactaagaatgtgttagttggcaacagtaattgttactatttgattgaaatgagtcatcccaaaaaaggtataacaattttattaccttctctattaatgattaaaatttcagctcctatatgagggagaatcagtgacctaatttatggattctcccgatttgtactttctaatttcttgcgaatgctgaataatttaattaaacaaatgaacccaatcttatcaagagagtaatacatatgcacgaatttgttgacatcagcatttctgaccttaaaacttatttataaaatcacttttccgcttgccatcagcaacactttttcgatggatattgaaccacacaaacctctctagaaccgaatttgtccttaaagctagtataaaacaaattcggatctacagggtagacgtggagcaaactgatgaggaacagtcgctggggcgaaatgaagtccgctaggcaatcgcggctgcaaaaaaaaaaagtgaaaatgttaataaacatatacaatgtgtgtgttcaaggcggggtaatttaggcagcgccgcaattacatgcgcctcgggtaaattatatttatcgtgccacacgtgatgcggctgtggctagcagtttcctctagtcctttcgaaattatggaatgacccataaatgtgattacaaagcccgccgtggactgccaattaaatcgaggcattcgcggggtctccgtgttcgagtcggggttcctgtccggaaagtcacggaagcctttcgccggagaagccagctccgcgttgtcttcgccctcgccgctggaaaccaactgaagccaagacctcaccgagggactcaagattaggaggcagtccgaaatacgtagtgcggaaaggtaatgccagaccttatcggaagaagcggcgataagataagatacggcgcgatgtcttcgggagtgcttagagcgcttgtatctaattgattgccggcggattacagcactttcttcacgtcgataaaatgggtgccaggcctggaaattggatagacacgacactcatttaatgaatgatagatctgcccatgggcgaggtgctagctgcgaagtcttctgtttgcactgaaatcaatcagtgagtcgccttgctaagctcccgacctggatcgctgtcgccagtcgaggttcccagcactcggcgccacttctttaagccttcttgttcctgctccaaatcggacaattggtgaatcggtaacgacgtgggcgatgattcagcactaagccctgctaagactgctgagtaatggccaggggaggaggaggacggcgctccggcagatgctccgacgttgtagttcgtgtgtcctgtaatcaaatttcaattaattaatgactttttagcaggattcattagcactaagcggcagtactaagctggcaaagtcaaaaacctttcggggccggctggttacggttaccccagaaatccccggattaggaccgtaatggcaacaaatcttgcgtaaacaaaggaaggaggacgaatcgcttgactttgcacaccctctagtgctccctctctttctgtctgcctgcggtgcctctttgtctgcagcccctgttgtcctttttgcagcctcaacatggctgctcgggattttatttttccccctgcctctcagagagcgagagagagagagagagagatagagagagcgaacgagagaaagggctctccaatgtgtacacacacaaggggtagcaaggactttggaagcaaataaagagtaatataagggtgaaggaccaggcagccaaaaggcagctgggacacagtcgcgcttgcctctgtgatcatccagctgaagctcgctgcgaagtgctccacttttcagcacctttgccaaattatcgccgtcttgccaaatcgaagtccgcaaaatatattacatcaccccagcccaacagcacccacgaatcagaaatgctaattgatttcacgtggccagaagcaaaagttaacgcgaaatcgtcaggaaatacatcttcacgacggcctcccaaaactcgctaatgcagtgcaaatatcgaacattaaatatattatggaaataatatatctgtcgttaattttttgcacccaagcgagcgaaggatttttcagttggaggcgtgtagttatccaaaccgacaattcacagccttt
PCR verification status
Line was not verified.