Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT37579 chr3R 2707640–2709759 (2119 bp) CR44931, CR44932 activityactivityactivityactivityactivityactivity
active
ventral epidermis anlage subset, ventral epidermis primordium subset, head subset VDRC

Annotations

stageannotation termintensity
4-6procephalic ectoderm AISN1
7-8not active0
9-10ventral epidermis anlage subset3
11-12ventral epidermis primordium subset3
13-14head subset3
13-14lateral epidermis subset1
13-14brain subset3
13-14dorsal epidermis subset2
13-14anterior ventral nerve cord subset3
15-16head subset3
15-16brain subset3
15-16anterior ventral nerve cord subset3

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0266236CR44931overlapping BDGP FlyBase
FBgn0266237CR4493213260bp upstream BDGP FlyBase
FBgn0260642Antp14335bp upstream BDGP FlyBase iFly
FBgn0001077ftz15675bp downstream BDGP FlyBase iFly
FBgn0262897CG4325221524bp upstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

ttctgcggatactcacgcactcacagtggtgcgtatggcggccattggcatggcatcatggtggtgccatgatggtggtgccgttgcgatggtggtggcagttgtgcgtatttttgtgtcacattccaatctatatcaatcttgtgtttgcaatgacggatggcatttgtcaatgtcagacattttcgttttccattcgagcctctaaatggcagacgggcagaaaggcaaaaagccggaacaggaacgcgggctgggtcctgtgttctgtatcctgttcagatattccgggggccttgaagtcactcagccacttgccaaagtagtcgcccacgaccactacaccacccacaccgcccacttaaacgccctcgacgcatgagtttgacgaatctgatgtcaaatattttcctttgttcccttccacatttttttatgaaaagcattttctgagaattagaattggcttccctgggtgcgtccccgaagcaatggggtaatacattgatcttgggggttgttggtttgctcccctcttccctgaactaagtgtctttgcgaatcagcgtgtttgtaccggaaatcagtaaatgtgtttgcattaattgttttcgattcacaaatatttgcattcttatggagattccaactcttgtagttggggaacgtattcagaaaaaataaaatattaagataggggttgaaagtagtagaaattagaaactaaatagtatgtattacatgtaaccataaattatcaaatggcatactgaaaaaacaaacaaaaacaaccataaaataataccttactctccgcagtatagcatggtattttttgtcctcaacgaacacaactctcgtgtagattttatcccaacgaaatctttattacacgtcacctcttgaaaggagttactcgcaactaattggaaaaccattaatcacagtgctaaatgtttaatttagcaggtcgggcgggacagtcgccgtcaaaacaaacactcgacatcattcaacattaagtaatgataaaccaagacctgcgtgtccctataaaatatgaagaacaactgaaacaatgatgaggttgagcagagtaaacagaattcacccgccaatgtgtcagcaagcaaaaggaaaaattccaaaccaaacgaaaccaaaccaaaaccaaaaccaaaataaagcgagccgaggagccgccgttttgttgaacatcattaattacaaaatacaacgagcggagtggtcagaattaatgaatgcttatgagatgccactgcaaagatgtgctaaacgcacgtccagcccagtaaatacggttccagttcggttcagacccactccaaggatccgtttcgatccgtgggcagtcggtcgcatcggaaattaatggactcgcccgaaattaaaaccgaaaaacaaaaccgaaatgcataaacaattgaaaagtgtgtcgacgcacgactaaataattgggtgggttatagaactcccatatcgaggtaccgtgttgtctgcctcgttagagactttctgtatcctttaacagcacttttgtagactccatgtcgactttgcgtttgtttgatcacttcgagtggagcgcagtgggcaagtggaagcggagttgggtgattgatgaagcccaaacgtgaatttcacacccagcccgatatcgcatacaaatcgaattaaagacagagcccaacgatgcctaattaatttccaccaaatattgataaatgactcgccggccagcagcaatgcaaatctacaaccgaagaaacagcacagttcttaccacacttaaatagatgtttataatattggactaactattttaagctggaaactaatccactttaggtacttgtatttttgatccgcaataaataaaaccactctatagaatggataaagattattcacgtattattttagctaagcaataacttttgatacttcggtgtattgatactacagtactataaatctgtctatatagtttcttcccatattcgccttcgatgatatctaaatcgaattgatttgtccaattcttctttccgaatcgaaagttctctttttttttttggtctgtctcagcttggtttcgc

PCR verification status

Line was not verified.

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