| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT38156 | chr3R 3768111–3770221 (2110 bp) | dsx, lds |
      active |
trunk mesoderm anlage broad, brain primordium subset, ventral nerve cord primordium subset | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | procephalic ectoderm AISN | 3 |
| 4-6 | mesoderm AISN | 3 |
| 7-8 | ventral ectoderm anlage | 2 |
| 7-8 | trunk mesoderm anlage broad | 4 |
| 9-10 | brain anlage subset | 3 |
| 9-10 | ventral nerve cord anlage subset | 3 |
| 11-12 | brain primordium subset | 4 |
| 11-12 | ventral nerve cord primordium subset | 4 |
| 13-14 | ventral nerve cord subset | 4 |
| 13-14 | brain subset | 4 |
| 15-16 | ventral nerve cord subset | 3 |
| 15-16 | brain subset | 3 |
Whole-slide images
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0000504 | dsx | overlapping | BDGP FlyBase iFly |
| FBgn0002542 | lds | 17899bp downstream | BDGP FlyBase |
| FBgn0261453 | scaRNA:mgU2-41 | 20317bp downstream | BDGP FlyBase |
| FBgn0037531 | CG10445 | 22091bp downstream | BDGP FlyBase |
| FBgn0014931 | CG2678 | 25840bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
tggaagtcaaaagtggaaccttaggacctcaagactctgatattaaatttatatgacgtttaatctacgagcttattgcaatgattctacgtctttagcttatcattcatattgggtcaagaaatcattgccaaattggctattttaccatattttaatttatatttgcattgactgtaccagttgtataactttgctgatcctgtcataattttatacttatatggttgtaagctgtatgtgcacattaggacacatttaaattgccagcaaaaatgcccgtacgaatgtggcattcaagctgccaaatatttggctcgtccaactttggtacctctaattttataacattttaatgaatgcctgctcatactaataggcatgctaaatgagccaagttgtctcgcaatgaaatctcttgtctgattttttgtatagtccattgtggctttagctcattaggaatcgaataaagatattttacaacagattggctgcttaagtatgtaatacttcttgttctaagtgagctaaacacgaaaaagcaacaatgtatttaatgcaaaatcggggttaaaaggtttaagtatccatttacacctcaatttgctcagtatatttatggcacattaaatacattggatggcaaataagggtatatgtaaagttactcatgtttaagctgttaacatcaaatagggtaagttgccttaataatatttttttatttttctaacctgacaaattgctacaaagattaaaatacgtctaatatgttatcgtgtctgctagataagctcttcgcgccattccgcagcccaattgaatttgaaggtcgtgcaagaaaagcggaaaattcagagtgaaaggaagcagacacacccgctaatatagacgtcaaccgccaattttccggcgagaatcgctgacagggcaaaaacggaaagcaagccggccaagtgcaaggaaactggcacagtccgacaagctgttctgggtttttggggcgccagagtggttgaagaaaagtgtgccccatcaatacgccacatcaatccaccataccgaatgactactgtggcgatgtttcgggactgcgtcaactttttatggattacacgtggcgggcatgtaaagttgaattaagtgtcaaggcgattgatatctcgtcggtgaaatatcaaacgtagaacatttgaacgccgaactattagcaactagaaaggaatgatgattcctcaatattataacgcatttagttgctttgggcgaatgggtgggtagtcttttaaaaatttaaattccatataaaacttcatgtaaattgaaaatatggcgaggtagtaaaaaatttagcctttgcgatctatattccaattactaaatcatttctttaaggggctacataatgtttgcattgctaaccacttggtttagcatacataataataataaaatacaagcaagtaaggagagcaattatctttggaccgtaaacttttaatattactttctgtattcacaaattatcttccggccgttcaaattctacacatcgagcgcattcttataaggcatctgcatctatatacatatattgaataaaatgtgcttgttttgtgtgcaaataagttgtgctcagtttgcaattttgcaataacgtccaatttggccctggttcaagagagaatgccgccgacgacgcgtaggaaattgcgcgtgaattgcataaagagagctctctaacaggtgagttgggggtagaaggcaaaagatcctacccagaaatatattcgccaccaaatgaagtataactcgttcagaattggccatttattatagagcaaattagcataggagtggctatatttaatttccgggtcccagcgatgcacaattagcgtggtttttttctgccaaactttggcatgcccaaacacctacgatgatgagtgaatgtgcacactcgatgtgggaattttagatcggaaaatcacttacaccaacttacagtagaaaagtcccacagttaataattatagtgagaaaccaagctattttctttattcaactgaaatcaaattgtctaacccatacatatgcaaacgaaa
PCR verification status
Line verified as correct.