Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT38158 chr3R 3771478–3773613 (2135 bp) dsx, lds activityactivityactivityactivityactivityactivity
weak
ventral nerve cord anlage broad, ventral nerve cord primordium broad, anal pad VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10ventral nerve cord anlage broad1
11-12ventral nerve cord primordium broad1
13-14anal pad1
15-16not active0

Whole-slide images

No image data available.

Neighboring genes

gene IDgene namedistancelinks
FBgn0000504dsxoverlapping BDGP FlyBase iFly
FBgn0002542lds21266bp downstream BDGP FlyBase
FBgn0261453scaRNA:mgU2-4123684bp downstream BDGP FlyBase
FBgn0037531CG1044525458bp downstream BDGP FlyBase
FBgn0037533CD98hc28653bp upstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

cgcagggtttttggcactcgtaaaattaagaatgaagaaaaaaaaaggaagaacgttttcccaaagagcgtagatttcttttcctacgagattccccaccaaactgggtttttactgccgcccgttacattcgcgttaattgctgggactgtgatataaatcagttgatatgacatccgtgtccttttgaaccgtcaaatgaagggttctggctgaaaattgatttttggtccaacccccatcgaattgtgaatatgtatggttcacgtatgtggtaggctgcgaataccttctttgatctttaactcagttaaattcgccaattcgaatcggttatgtctatttttgtgccactttggcggattattggaatatcaaaatatataaatatgtgtgctttttgaaaagtgcattttagtttgatatgaaaattattattattattgttgtacgaattttgttaacctcaatagaatctaaagaatccgaatttaaatattttgatgaatttcggactgcactttagctagtgctcattatgcattataacatttatttaccgcatttaggaacgttggctttattgaatagtccatttgaaagctttgtgcagcaaacagttcgtccgtgaacaaacataggctaaattaaatttctcatttgactgagcagcgcacctagataaccaatcagtgtttgcatgctaaattcttgttattaagatatatagatatttttatgcaccccactcgtgtgtagagaattcttgcgcaattgaagcgacaaaaaatcgtaaagttaatgaatcaattaaggcgaaaaaacactgtgcagcggacgtttcacaaaccagatttggatatttgcatggatatgaaaataaaatcggaatttattgcgcgtcgattgagtgataggcaacatgttattcgaattaaaaaacctgcctaattgtcaaatagttgtagccagcgaggttgttttccattttttttttttcaattttaatagctttggccagccagttgcatttagcaattaacgaaagaattgaacaaagtgcacaatttgcatgtaagccattaaaataaatatattgaattattgcccggcaattggcaattggaaaatggcattcggtaaatgtcgagtgggaagcggcattaaatgttgagcatacgccgtgatggccataaatcaggctgcagagatacaaagccatgtctgcaggcgggccgtcataaatccaggctagtctcaagacaattaacggattaattatatctgctgagcataattggataattttgttgcatctctcgcaatttgtcccgaggcccatccaataagcagtgcccataaattatccctgcgatagcgcgcctctcataaataagaccagctaaattactcgaaaaatgcgaatatgtctaagacattctcggcacttaatgtttcatttgcaaaagcagaagcccaagcgatcggcccacgttgcgtatacgttcatacgtacggtggtggtcggtcaagcataaattaataaggaaaataccattttcattgcgcactttctgttgtcaaggcagacccgtccgagccgcaaacaatcaagagcaactcgagagcgcccgactgcagttcgcccatcgccaacgagagcgccagaaatgcatcgagagtgcatttgtttgcgattacgccaacaaattgctgacacgtgccgattgccgtggtcggggatgggtcgcggccgggtctgcccgactatacctattcctattcctatagctatatctacactatatatactatatatgttcgccagagagaaagagagagggagcgattgagcagttgagcggacgagagctagacagctgtgggtgcccgctggtgtgcgtatgtctatcataaacaaatgcatttgactttgccttcacacgcgagcaaagtgcaatgtgagtttcccatgtgctcaaagacgactgcttcacttcagacccgtccttggcttattcaattttattggacacaggcttttcaagacctcactctatgtgctgtgagaagatcatggtaatggtaggaaattaatgaatataaaactcgtctgtaacaaagtgagggcaacca

PCR verification status

Line verified as correct.

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