| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT38781 | chr3R 4971043–4973269 (2226 bp) | pum, CG11997 |
      active |
head mesoderm anlage, mesectoderm anlage, head subset | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | head mesoderm AISN | 2 |
| 7-8 | head mesoderm anlage | 3 |
| 9-10 | mesectoderm anlage | 3 |
| 11-12 | not active | 0 |
| 13-14 | head subset | 1 |
| 13-14 | tracheal system broad | 2 |
| 13-14 | posterior spiracle | 2 |
| 15-16 | head subset | 3 |
| 15-16 | tracheal system broad | 3 |
| 15-16 | posterior spiracle | 3 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0003165 | pum | overlapping | BDGP FlyBase iFly |
| FBgn0037662 | CG11997 | 32196bp upstream | BDGP FlyBase |
| FBgn0037661 | Ada | 79019bp downstream | BDGP FlyBase |
| FBgn0037660 | beag | 80244bp downstream | BDGP FlyBase |
| FBgn0037659 | Kdm2 | 82077bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
ttttctgtggtggctttcactaccgtaccacttatgttgagattacacgcttgtcagcgaaggcgtttcgcccacaaaatactcggaaaagggttttttggggtggtggatattctcgttggaagaccgataaaatgagcaatatgttgaagttaccgaagttagataagaagtgtacataaaacaggagttgcaagcacttgaggaggagtttagaaatgcttttctattattattaaatttatatactagccatatggataattaatttatttatttatattttcatcctattcattctctgcgcatagactaaacatttttggcagctcattcaactttgctcatcttcaaaagtgttcaagtgcaacttggatgaactcaacttttggattacgattttgctagcatcgcctcactctatgcaaaagttttttcatggtatctcctcgtttttgctcatttatatatatatatatacacacttttggctccgaacgattatgaatgcgaatggaaatttagacagacagttgggcagaacgaaaggaggaggagctactggctgcctggctggctgttacaaaagcctcttggctactaagcggctgatgaagtggattcaacggcaggagcctggcataatttgcttaaataatttgtaagtgcaaagttatgaattgcttggatgagcagcagcttgcagaggattatattcctcacttctcccctctgatcgccccccgcacagcagtttgccattttcccgggaaacgcatttcgccgcaaatcgttttccaacccacctcccaccaaccatcgccacgaaatgctctaaaatttgttcggccaaacataaaatgttaattgtttgtttttccccgtttgacaaccccattttcctaggcattttcaatgaggaaatgaagcttagaattcacagaagtgcatacaaacaaaataaaggctggaaaagtgggttaaatgcttaatgatctgatgatcatgctgggaatgggaatgggagctgcagtaattgcaaatggaaaattgcaactgcaattgctggcgcagcacgtagaactcatttctctgcctggttttccacaataaataatcgtacacatgcggatgcgcagatacaaagctactgggtgaaagtttcacacactgtgtgtgtccatgcttaaatgcaatgaaattggattttcattacgaatgctcgtcagtggataatatcttatggagggttccgaaaagcgtttgctactctctcccagtttttcagcgaccatttatgaattacgacaatttcactgaggttggctgacgtgtgacacagtttgtctgtgggagggggagttcccataattgttcttacgtgacacatttaccgactcctttcattctgcaaaaagacatggaaaacacaaagaagtaaaggaactggtatcttccatacactttgacagttttcatatgcgcctcacatggcggcacgtttggccataggctgagaagttgactctttgtcagtttgtaggcagcacgagcatatgtatctgtcagatactttggccaactcacgttacacgtagccggcatatacttcccagaagagcgaaccgtgttcactgcaccgggcacgtttgggccaagtgtatctgccagatacttgtcacaaaaaggaatgctatcctaagagttgcatatcagttaatcaattagcgcaaatgatgatggtgcagcaataatttatatcctatactttactgtctcaactgcatcattgaaatgaactgactcatgggttaactaccaatcaatgtccaccagcaaacaagactagactagaaactaaaaacaaacgcacacaacaagtcgatgaaaaccaaaatcaaatccaaaacgcacttaactcaatatggctaacttttggctcctagatcatcgtatcgtcctctgtgctccaaccaaacatatgtatatatcccccctattccgccacatcccagtgccctccgcatcgacatcattcaaatagtcgtagctaacaaattgcactgtcgaatgcaatatttttgcttttagccataataccttttacatatgctacgacagatggcagagaagagcattttaagctgccatctccacccacaagctccaactggctcccgtccctcatcattctacatgtggccccaactctctcctcttgccacat
PCR verification status
Line verified as correct.