| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT38822 | chr3R 5045061–5047272 (2211 bp) | pum, D1 |
      active |
anterior endoderm AISN, brain broad, ventral nerve cord broad | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | anterior endoderm AISN | 2 |
| 7-8 | not active | 0 |
| 9-10 | not active | 0 |
| 11-12 | brain primordium broad | 1 |
| 11-12 | ventral nerve cord primordium broad | 1 |
| 13-14 | brain broad | 2 |
| 13-14 | ventral nerve cord broad | 2 |
| 15-16 | brain broad | 1 |
| 15-16 | ventral nerve cord broad | 1 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0003165 | pum | overlapping | BDGP FlyBase iFly |
| FBgn0000412 | D1 | 18744bp upstream | BDGP FlyBase |
| FBgn0260935 | ird1 | 21418bp upstream | BDGP FlyBase |
| FBgn0037664 | CG8420 | 27310bp upstream | BDGP FlyBase |
| FBgn0037665 | St2 | 32504bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
aaattatgttggcctcaaaagagagcgtttattaccaaattcttaaattcacggttttgccaaacaattttcaaaaaatttctaaatatttttccgattaagttgattgaatgataaacatttgagtcaaacaacaattacaaataaagcaaatatttgaaacatatgcatagccggcttaacgcttgtctatttaacctaagacaacaatttcacagacgcaaagatttggaacggcgatggttttagagattaccaaacaccgaaatctcttaacaaatatttggcgtatccaagccaaaaatttgtaaataaagccaacgaaaatgctttaaacgagcgaaagacggcaagagcgtgaaaaaaaacttatatagtgagacaaagaaaagcttgacagtgcaaaaggaaataagcttaagtcagaaaagtgcgaattttgatctgctctgctcgcacacaaaaagatacaaaagagattaccaaagcagtgatacaatataaatggaaaacaatacatgaaaatcacaacgcaatggaaatgctgacgtaatatttttgtttcatttaatatgggtcacaatctccgaaaatgaatgaaaatctgtgcgggtaggcaagaaaaaataaatcaaataaattaattaagccgcaattaataagtaagcataaaaaacaaggcggcaaagaggtgccaaaaaatgcggcgccgagctaaataaaaatcgccaaccggaaaagtgaacaacagaattaaaatcgcttttgttaatgaacaaaacaaaagaaggaaacagaattcagttgagaataatatgcactgaaagaaatattttctatagaaaaaatcgtggcgcagagatgatctccccaatagtttcaaaaacgagtcgattcaacattattgaaatttaaattcggtttttttttttttgttcataattaaagctattcgagacccaaacaaatttaccacccatcactcccgcatgtaggaaaatccgcacataagagaaaatcgttcattaacttgtccttgactgtgaagatacaaaaaaacaaaaacgtagatacaacgaacacacacacgcacattcagctcacacagatacagcacgcatacagctgagcgaaaaagggagcgggtgagccagaaaaaaagggagagacagaaaacaaaaaccggcctcctctttgttggaaaatatgcgtgagagagcgagagagaagccaacgaaaatgctcgcaaagcatagacagcgatatcaagaagaagaaatggccagaaaaacaacaaaaacggcaagaaaatcttagaatggcaaataggcgaacgcataaaaaagaaaaacaccaaaggcagacagagacaacaaaaaaaataagagagcgaaaacaaggcagaagtggggtggggtaaagggtggtggatattcggccataggctcgtgcgaaagagaacgaaaagaaacaacaaaatagcaaaaccagccagaaatttgtctacaaaagaaaccttctaaattacattctgtctgaatttttttcatactgtatattcaaagttattgttgtttttcttattcggctaaaaaagttggtgttgatgggtgaataggttatgtaaatgattatacgctgggctggattgattgaaagtggcttgacaggtcaacgtttccggaatcattcataaaaaagaattgcacaaagataaattaaaatataagagcatatgaagcttaaaaattttcgctttcttgattcaaacacatctttttaacattacatatgtggtttatagtattattaatagacaacatattgtagctatcttattaaactaattgcccatgataggcacacaaaatgaaccagttcttaagtaaaattaatgtccaaattaattgaattatctaataacaacaaagagctcttagctacacactaaaagcaatcatttaaaaccagtttttaattcaataaaaagttctatcttaattttcgtattttcagttttaaagaactattatcgttggccttgacaattctaaaatctatctttaatcactataccgaaaatactctttactttatattttggcgaaatatatttacattaaatatttcatatacaacacaaagtaaaacaaaatgatatatttgacatataaacaaatcaagcaccagtttttaaatagcaaatagctca
PCR verification status
Line verified as correct.