Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT38964 chr3R 5311657–5313720 (2063 bp) CG16779, CG8147 activityactivityactivityactivityactivityactivity
active
brain broad, ventral nerve cord broad, ventral nerve cord subset VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10not active0
11-12brain primordium subset1
11-12ventral nerve cord primordium subset1
13-14brain broad2
13-14ventral nerve cord broad2
15-16ventral nerve cord subset2
15-16brain subset2

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0037698CG16779overlapping BDGP FlyBase
FBgn0043791CG81478866bp upstream BDGP FlyBase
FBgn0014380RhoL11166bp upstream BDGP FlyBase
FBgn0037700CG814918721bp upstream BDGP FlyBase
FBgn0260010rump19918bp upstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

tgtcgcaaaactcagtgccaataccgcttttgtgtgggtgtgcgtctgggtgtgtgtgtgtgtgtgtttggcattggtggagggtgtgcgtttgtttttgtgtgttgtgtcagcacatattttagatgcttgttaatgccagccataaataaatgggaacatttatcacggaaggagaaggcatcatcatcatcactataacgatcgttatgtagcataatattcggcgcactgaagggcttgtcgaactaattaatttattaattttaatcccagaaaggcaatcattgatttaagacactcaaaatcatttaaccattctgacatttcagattgattacttttatgtaatcatcagtacccattgatgtggtcataggttttctatgcataacaggacaaatctgtgcgaattacttttaaccattgagatttaagtgggaattataaattataaataattttgcataatagatatgcttatatagttgtatatactgttttgttagtcatttggttagtactcaaataaacggaaacaccaatcaaatcaatataaattccaaatcaaacttgagcaaggtgtaaacaggaaggggaagagggggggcacgaaagagtagagttccactggggaattggggtttaaccaccttttcggcttaccgatcgatcaggggctgcatttgcgttttgcgccgcgttccacggtgcgtatgatggatgttgattgtcgtcgtcttcgcctttctttcgatgtcggccccttaaaactggctcactgaactgcggcaatggcttttctctacatacgtgagcggtttacacatgtatgggtgtgggtatatgtataagggtatctgtatctaattccgtgcacatagatgctgttcgctgactgtgacattgaatcgctattccattgccgttgattgtagtagttgcgttcgttttccttttgcttttcctgatttttgttatttttgttatttttttgttttacttttctcttttatttcacacgcacggtcacaaaaggttggccagaggcaagtgggcggccattcttgcgccccggtttcacatactttccttcgttatgtacactcacacacaagtcacgccttgttctgctattctaccagcgatttgttagtccttttcaaggtttataactttaaaaagtcgtagtttactttagtttagggttgattcattgtaaagaggacggcttgacacactttcttgcgattacatctaaacatcttactgtggaaatgaaactgaaattagtcactactaatggatatttgtggcgtagctggaattttatttttgcccattacagttagtccaaatttttgggatctcggcattttgttgtctgcacttgttcactccgattttggctttatgtaattgctacgcttcattaaacagtttatgaatttggttttttttttttgtggagtttcgacttcagtgcattcctcgttattacaatataaaacacatttttatacttggccaacaactttggccatctgcaataacaagaccgaagaagcgaaacagaaaatagtaataaaagaaaaagaggcagaaacgctcgcttcgggcttctcgcttagaacaaagctagggaaaaaaaagcttttaagaactgcgggccgttcctgggaaattacttaagttttcaatgcgttttactcaatttgactttgggtcgttgccgacttgccttccatctaaggatccacaacacccccgctcattgccgctcgactgttgtcagaattggcgcattaagcgcaaaaagtaaagcgaaaaacagcaaccgaaaaaggaatggaggagggtggatggtggggagaggctgtacgctgaaggttgaagggaaacccaacagctcaaccgcccagaagcgccctaaagtgggctgcctgctaaccgagttttgtagccttatcgctctgaaaccatattaaataatacgttacacagcgacgtcggcagcggttcttccagagggatatcagcgctccaggggtgctttaaacaatt

PCR verification status

Line verified as correct.

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