Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT39307 chr3R 5958301–5960569 (2268 bp) tws, knk activityactivityactivityactivityactivityactivity
active
ubiquitous, brain primordium broad, ventral nerve cord primordium broad VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8ubiquitous2
9-10ubiquitous2
11-12brain primordium broad2
11-12ventral nerve cord primordium broad2
13-14brain broad2
13-14ventral nerve cord broad2
15-16brain broad2
15-16ventral nerve cord broad2

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0004889twsoverlapping BDGP FlyBase iFly
FBgn0001321knk6916bp downstream BDGP FlyBase
FBgn0037792CG62417524bp upstream BDGP FlyBase
FBgn0051477CG3147710260bp downstream BDGP FlyBase
FBgn0261817CG4275910491bp upstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

tgtagcgattcgtgcttaacctttacgagttgctatagttgctcgttttttttttttttgtaatagataatgcaattgggggcgccggctcagttttagtttaaaaaaaatattttaggggctgcgggggcctgtcaatttaacttttgcatgccgctcacgtcgctttcggcgttttgttcaagtgcaaagatcaatgctagttgatagggaaaagttgttattcgaatgcgttcgagactagtttgtttacttctcactgaatttgtttattggcgcatttaatgccaacatcaaaatgatcagaaaagcgaaaatagatcgaggaaatgccaaaacatacgtaaaatacacttgcaatttggccttgtaagctctttattatgtcgaaaaaaactcgaactagaaattcaattatttatataaaaaagagtattttaagaaaataaaatcaaaacgatcacatccacgaaatcacaaacctacaaccaacctcacaatactccactgtagggtattacaaaaaagttggcagttcccacacaaaaagcgagtgacgaacgcgaagagcagcagagaaaaaggaggagagaaggagaagagcatcggcaagggagaggaaagaattaaacttaccggccatgttttaccgaacagtttgcgtcgattttaaggagccgcagctaaaacaacaacaacagcactagaagcaacgaaaaacggagcgacaacaaaaataacaagaacaaaaggagaaggccaaaggagctgcgctcgcgctctctagctccgtctctttctcacgggggtggtgttgttgttgtagctgccgattttaaagtttcaaaaagttgagcgcgattattacacttcttcttctacgctcttttcactaattcgtttgattacactttggttttccgttgttgtttatgcatttgattcttttgttaattgtgtatttttttgtgtgttagcacgacttaagcatgtagaggggaagaaagaactgcaaaagtaggggaaattattttttttgttcccgacgacgacgtcggcgacggcagcgcagcggcagaattttggcgtgcgttttatacgtgcatttgtgcgtgcgtgtgtgtgtgtgcgagcgagcgaaaggaagagagcgagtgcagccggtggttgtgagcgaatacaaaaaaaattacttcacacagataaacgagatatttgccagttaatctacaattattattatttattgcattttgccaaacaaatgcgaaatacaaataaacacacacacacactgaggcagacacacgtttgcgccgcttgctttgtctctttgttttatcgcgaattccgagcaaaaaatatatgcgaaatctaaccttcaaaatgagaacactaaatagtggcgatgccttgttactttacgcctgcgagtaaaaaccgcgtgatcgaaaaagggataagcatgcaatttcccattttttactacccaataaacgcaggcaaaaatcaaatgttgccgaaaataagacgtccaaaaaaagcttctgttttctgattctgtttccgattcacattctgcgcgctgcctcttcttcccgtttttgccgcctcttttgctgcactgcttcgtcgttgcgtcgtaatattaatatgaatgcgagtgagtgtggcttttgcttttgcacaagcggcattccgcctcgattttcgctatagcacgcacttttgcactatttacacggctaccgaaccactcccgcacgctccgctcgcttttttaaattggttagtgactaacggattgcgataaatccaacgcaaaatggaagtataaattttgttgcaaatttcgcactttacaataagagttccaagctaccgaattgccgctgtgcgaacggcgttgcatttgcccagtgttgggcagtataccgaggcgttggtgttgcaaagtactcgcgactaacagcagactgttggcgccaatgttattggtaacggtggtttggcgggcacttcgaattgttaaatgtttaaataaactcgccttttccaaagcataatataattcctattgttgataccgtttgggcaagttcattgaaagcaataattgatcatatttgttgataacatttttattaccgcctgaccatggtctattttttataccccaaaatatattaagttaacatgcatgtggaaaaacttaaaaatatgatactgcattgacttacttgctggcttcttggctccattgatgttg

PCR verification status

Line verified as correct.

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