| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT39428 | chr3R 6208575–6210688 (2113 bp) | CR44938, Rfx |
      active |
yolk, macrophage, ubiquitous | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | anterior endoderm AISN | 2 |
| 7-8 | posterior endoderm anlage | 2 |
| 7-8 | anterior endoderm anlage | 2 |
| 9-10 | anterior endoderm anlage | 2 |
| 11-12 | ubiquitous | 2 |
| 13-14 | ubiquitous | 3 |
| 13-14 | yolk | 3 |
| 13-14 | macrophage | 3 |
| 15-16 | ubiquitous | 3 |
| 15-16 | yolk | 4 |
| 15-16 | macrophage | 4 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0266243 | CR44938 | 2641bp upstream | BDGP FlyBase |
| FBgn0020379 | Rfx | 4786bp downstream | BDGP FlyBase iFly |
| FBgn0259938 | cwo | 5405bp upstream | BDGP FlyBase iFly |
| FBgn0045443 | mthl11 | 18179bp upstream | BDGP FlyBase |
| FBgn0037814 | CG6325 | 20114bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
ggaaagcccagcacaaagaagcacagtaaacactgattaacgcgaattaacttaagtgtgattaaaacttgcaaaatatggatttatctaactattactatcaatttaaaaggttttcaaatattttgaaatttggttaaagttaaaatattggacaaggtttgttataaaaactagttacgcttttaaattcctttgtttgaaaaaagaaatcgttggtattttcgcgataaaattaaacacttcttccagcaaaactatatagcatattagttcgagttatggagctcgaactgtttaaatccgaatcaaccgcaaaacaaaaacaacagcgttttgtaaatacgaaaacatttcaacaacacgtgaccaacaacaaacctgagtgctgcaatggtgtgcgtgtgagtgtgtgtagatgtgcgcttgtgtgtgtgccaaatcgctgacatgctcggctcgcgtgagaaattacgtcatgcgccacgaattttgagttgttatttattattatttttttgtactttttagtgagtttgccactttcaacgtgtctcgattaaaaacgaaaagcaaatggatcaagagtgtgagagagagagggggccaatgtagcgtttgattattatttcgttttttaaagtgaagccctcacagaaacaacaacaaaagtcgcgacttgttgcgctctgtaataaaaacaaaatgtcggccgagtagagagtatatgtgagtgttgtttgctttgggattgttgttgccaagcgccggttatcagtttgcgctctcttgcgctctctctctcgctcacgcagccgccgcccagttgacttctgtttcgctttggaatttgtcacgtttcacgtgttttattgtatgccgctgacttttgttgttgctgctcgccttgagcttctgcgtcgttgttttctttagttattcgtagtatatatgcacataaattttctttttgttttttttttcggtttcatgttatattgtttgtagcccgagactgtaacggtaactctccagagttcgtacttgagaatcattggtgcacttaaagttaaccataaccatattggtatcggcttggcaaactaaatgcttataaatatatgtacatatgtatgtatataattcacacgcaactcatttatgaatatctgcaacaacaacaacgctgcttgtggttttgtaagtgccgtgagtttgcgagtacgtgttgtctagtcatcaagcccccaaatgtcgactgcacagtggagccaatcgggtattttgcgattttgccttagaatgcatttcaaacttataaaaacttccctttaaaagcaggtctcttgaaatataatcatattatggtatgtcggcatatacatttgtatgccagttgttacccttaaagtaggcaatagttacgtttaatggttgatacatgtaaattaacaaatttcataaacatttgatttttgaaaattgtatacttactttatattttagtgcctgatttgctgctaaacatatcccctgcctaaacaaaggcaatctgtcaaatttgccaatcatgtcgtaggaatcccctgggcttatctcccaggggaatttgtggtaataaaatttgagtttctgtcccactgtggcaatcacgttcgccgcacacgaaaagccttatctctattctctctcccaacaacacatgttgctctctcttctcctttggcgtgcacgtcattaatttggcgctctctcgtctcttttttggggtctcgtgccgccagcgagttttattcattcatacaacatatagtatctatatataagggaattttttttagttgtccagctgcgggcgcacgtgtcgttgcccctgtccctgtactcttcgactttttataaacaattctcgagatttctaatctacataagaacaagaacaacaacaacatcagcactggaaataacgagattgaagtatcagcaccgccagcgcaatcgcaatttgtgttcaaatatattatagctctcggacccgttccagttcggttttatttcagattattttagcttttatttctatttttattgggttagatcgctcttatcagggg
PCR verification status
Line verified as correct.