Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT39482 chr3R 6308570–6310707 (2137 bp) CR44955, CR44939 activityactivityactivityactivityactivityactivity
active
ventral nerve cord subset, brain subset VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10not active0
11-12not active0
13-14ventral nerve cord subset2
13-14brain subset1
15-16ventral nerve cord subset2
15-16brain subset2

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0266260CR4495517871bp downstream BDGP FlyBase
FBgn0266244CR4493920771bp downstream BDGP FlyBase
FBgn0001235hth24713bp upstream BDGP FlyBase iFly
FBgn0263547mir-494430157bp upstream BDGP FlyBase
FBgn0037817Cyp12e146145bp downstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

atgcccatctccgctcgattccgagaaaccccagccgagcataagatcccgaaaagcccaataaacaaattccctgacatgtttaacactttccgctggcagagccaggatacacaaaaattaaggaccatctctggcctttgtcagtggcatccaggcagccggagatggggtttcccctggaaggaaaggggaaaacttttgtgtaaatttcatttcgtttggcgattagtgtcgcctctcggggcgcgttttcattgttgaaattgttatgcgaccattaagacattttataattctttatggcattagagaggcccgaacacaaagtgaaattcctgctaatggcaaaatgaaagagccaccgcgggtggtgcaaaggatgttcgcggaaattagcattgagtgccaaggatgttccccattgttatccttatcgaaacgcccaatatacatgaaccgataattcgaagcttcctgagccacatttcaataaatccagaatgccagaagtagaaaatcttaaagtttccttacaatacaatgtatttctccaacgtgtactgacgtatattcggaagtcttgtaacacgcactcacaactcaattatcgcacattcacacacacacacacacacaaccatagagagaaaggggggtggagaaagtcaacccctttcccagtctgctggtggtgaggttgatttacgacacccaggcggcgtcacctgagattaaaaaagtaaaaagcccgtcgaaagtggaaaaaaggagcagccaaatggcgagggacaatgaagaaaagggcgaaaggaagtgccggagaaataaaggcattaaaatcactgacagccaaaaggattgtgccgcaatcacaaacactcacgcgcacacatacacaggaacattcgaacgtcaaaaagggcaacatcattggcaccatgtgttgcgtaatttgtgttattgccacaccacctcatatgcatacgtgtgtgtgtgtgggggtattgagcactttcttttaacccttaacccctgtagaattcaatttcccccgtctcatttcggttgtccttttcgaaatcgatatttagtttttaaaattaattccaattgctgcataaaatatggcactgcacttcattttaattgaattcacacactctcaacacacaccttgccaattgtaatggtgtgcatatgtgtgagggggggggggagggggcgtgacagggcgcgaacaccgagatacacacttgcatgtataaattacctcatcgccgataattgcaggccatcaatcttgagcacatcacacaggaaaattgtcaacgcgcgcaaaaagtcatcagacacgagcacttttccagcttaatggccgaaggagctgttgtctacctatgcggttttccagtggcttgaggcgtcgtggggaaacggaattggaggcgagactctgcccatataggtgggcttcattaggataccatatacatacatgtggctcccctgggtggccacactcaactgcactgtgttgtttgaggaagatcttaaagtattataaattaaataatggattagttatattgaagctcatatgtatttgaaacagtgtgtatattatacttaatttcactttaccaaatagattttgaaaaatcgagtttgttgcctactgtaattgcttagcgttttccgacgggtaattcagtagcacctagtgtcataaaaggctggcgaggattgccctgttagtttgcaaaaggagctcaggctactactcaaaccccactaaacgactctatgtagtaagtggctgtagtgtaaggaaatcgttattagttgctagctgtgctccttggccagcagagttggttgacaggcgctacatcttggcccgcagctgtcttggactggcaattacttgtctctgaaatcttatcacgcattccccatccagccaaccgctcacacagccatcaccccatcatcccatcccggccacccactcacgcacatcattaacaaggcagctccgttggccaaattactcattagaaaatgtagccaacatctgggtgggtggcacgtcctcatccgcgcagtaacgaaacgaaacaaaacgaaggccacca

PCR verification status

Line verified as correct.

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