| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT39498 | chr3R 6338971–6341104 (2133 bp) | hth, mir-4944 |
      active |
midgut subset, posterior midgut primordium, amnioserosa | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | not active | 0 |
| 9-10 | posterior midgut anlage | 3 |
| 11-12 | posterior midgut primordium | 4 |
| 13-14 | amnioserosa | 4 |
| 13-14 | midgut subset | 5 |
| 15-16 | head subset | 2 |
| 15-16 | amnioserosa | 4 |
| 15-16 | midgut chamber | 4 |
Whole-slide images
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0001235 | hth | overlapping | BDGP FlyBase iFly |
| FBgn0263547 | mir-4944 | 117bp downstream | BDGP FlyBase |
| FBgn0266260 | CR44955 | 48272bp downstream | BDGP FlyBase |
| FBgn0266244 | CR44939 | 51172bp downstream | BDGP FlyBase |
| FBgn0037817 | Cyp12e1 | 76546bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
tagagagctatagtcctgggggcgatgcgatattcccccaggattagtgtcctgctcgctcggaccgacttgctcggcaaaaggtgtcctgcccgcctgcccataaataaccaaaagtgtcaacattttattttgctattttctgccaaggttcccccgtccattccattcccatccactccactcctccccagttcggctttcctttttccgcaggacctttctacgcagtgttgcgtgcctaagcgaatcggatgggcagggtccttcggataccatagtatttgttaatttggagtgtgcttcggtgagcgcgaaattcaatttaattgagctgagtgcctgccaggcggcacagctctcacacatttctcgccggattttattgtggcctgtcttagcttaaaagcattccacgccaagccaacccaagtgaacccaggccacgtcggagcaaactgcataaaagattcagcagcgcttttaacttgcttgaaaagcttttccatctccattcctatttgcgcatcttgtagtttggctgcattttgcagttttcagcttgccgagtgtcaagttctgcctgctgtcgcataatgtgcaaaatttgatgaagttacagtctccaggagacgtttctttgccacgtatcccaagcttaatgcactccgggatctctaggatttccagttttcagtttcccccaccttatgagcagggcccataattttgtttgccacattcttttcaccttttttgcctgtcgacctgtggcaggttctatttccttggcgtgggctggcttataaatttgttttcggccagatagtattattttctcatacggtgtgcttggtgtgtgtgctctggttttggttgcgagtggaatcttacggtcaagtcagggaataaagcgtgtgagtaatggacagcccagggcgtcgtttaccacattatgatgttgtgtgtttgaaaggatatctgatccgatacgatcggatctctgacggcatactcaccaattattcacttgcagtatcgttaggccggtgtcctgggccaattgtttcttctggtcctcggatgggtagggatgctgaaaggaaatgtcaaaatgatatgattacaatattatatttgcgtgtttgaagttttctctttagtactgtacatatattaaatggaagttgtttacatggaataaatatggaaaaccctgtcctgacaaatttcggagctgggcaaactgttgcagtgcccaatttatttacaatctatctagccaaccggccaaacaatcgatcaatcatggccgcaataaaaccgaatgggaacctgtcagcccgcgtggatggctgcacttgaaacgcagcattttcgggtgtttttggtgttatcaggggaccggttgcagtgcgtcctccttatcagcagtgccactcaaagtgtcctcaattgccgctaccttagggggttaagcacggggaatcggaccgcatggtgtgggttaagggaggtggggcggtgcaattggagcgcgtgtctagcgccaaatgggcaaacaaatgccaacgagtagtccacttcccataaatcttgcagtcgaaccgccgacacagtggcgtcagtgggtaaatagtttggctaaagtgaaagtgccactccccctggacaggcgacccgcccccttaacccctatggctgcccagcagctaatctaatcggctggctgccctggcgcttattacaatttcttttatttgcctagttgttgtgcacttattgttgattcaatgattccgatcgcagcacaatttcactccattaatgctgcttcgactgttacaggggaaagaaaatatccgaacatttttgaatggctcaagaagttaattttgtgtatacgtctactcatagagcagctttttagcatacttcaattttttcagtgcattaaaggcaagggtttaaccagtcacctggcggctgtcaaaaaattatttctaaggatctccgctcagcggaagttgccgtcaaatgattttggctttgtttcgccctcgaaaaatcgggatatgcttgtgcgcgtgctcgaaggacgaaggagcctttgtgttttaaccctcgactggcc
PCR verification status
Line verified as correct.