| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT39521 | chr3R 6379619–6381734 (2115 bp) | hth, mir-4944 |
      active |
ventral nerve cord subset, midgut subset, midgut chamber | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | not active | 0 |
| 9-10 | not active | 0 |
| 11-12 | telson | 1 |
| 13-14 | ventral nerve cord subset | 3 |
| 13-14 | brain subset | 1 |
| 13-14 | midgut subset | 3 |
| 15-16 | ventral nerve cord subset | 3 |
| 15-16 | midgut chamber | 3 |
| 15-16 | brain subset | 1 |
Whole-slide images
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0001235 | hth | overlapping | BDGP FlyBase iFly |
| FBgn0263547 | mir-4944 | 40765bp downstream | BDGP FlyBase |
| FBgn0264788 | CR44018 | 85382bp upstream | BDGP FlyBase |
| FBgn0266260 | CR44955 | 88920bp downstream | BDGP FlyBase |
| FBgn0266244 | CR44939 | 91820bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
ggctttggtacgtgttgttggcctggccagcagagaaaagacaacaaacgcacacacgttgggtgaaaagtaattgcgtttaaatgcgtttacattagggcccgaaacaaagatacaaacatatgtatgtaccatatgtggatatagaaggcacataatgcaatggaagtcagagcgacctaattgctctgaggcctgccgtgatgaccaaggacaattattacattacacttgtaatggcattattaatgccgttcggtgcgattgtttttacgccatttcccaggcgataagccagaaataaatctctattggcgactttacgagcgccaaaggccaacactcacccaccaaacgtaagccccatcccgttcatagtttctttttacgactttttaatagttctcacatagattttatagatctcagccccgaagctttgatgggcccccatcccccggctattcctcggctatttgttgttcttacttctggccagagcgcataaaattgatttccttttcccggtttcccgactcgggcgtttactactttctgggctgtcataaaatttatgtttatgtcgtaaaatttagttcgatttttttgccctttgagcaatcgatgtgcgtgttttcactacccctcctcgctgtattctgttttcctgtttttctggaccacaccaggtgtttgcaaagggttttccctcacagactcagagacaacgccaaaataaaaagaggagtaatacgcaacttttccggccaagaaattgccgcctgcttgatataaacaaacgacagacatttatttttattacacacctttttgggggtctttttttccttcgcctctgcgaagggtgacactttggtagtagattctagttattctaatgcacatttcataggcaattccaaattaggcaatgtttggcaatgtactcgcaccccaaccacccaccctcaacatcaaggtgtggccttgggtggctggccagtggtttgggtgggtggttactttcccttttcttggtggaaaacggggctgttctgtgggttgcctccttataaaaaagtaattttctcattcgaggctttttgtatattagaagaaatggctttatttatttcttatttctgggcgtacaagtgcgaaatgaggaaaactttttgccgccagctttcacttcagtttgctctactctactcgcttttcgtttatttcacttgagtattttctttttctggttgggcgcccgttaaattggcaagtttgttgtgctaagtttttggggtctctcgcttccactcgaagcccataaattagacgcacaaattagaaattatgtgcgcatttaaatgtgaagaggagctccggttcgctcccccattcatttctccggctctgtcactgctccatatgtttttgggccaacttcggcgagctaatgaaatggcagtgggttgccctggccttttagtcaaactcaatgaatatttaaagagcctgcaaacgaatggtttcgccaaaaaaaaaaaaataataataaaccagggaaaagaaatgaaaggaacaaaagtataagtacgaaatggaacttttgtgccacggcgccatttggcgctacaaaagatatttttccattgaaagcgttatatggccgggcgaaaaagttgtttaaatttagcacaagacacatgtgtgtatacatctcctccgttcagtgggtgtgtttttgcgggtgaagatgtggcttacaagccccagaaattccgcatttcgcatttctttgtgctgattcttactttatttcgcggaccggagacaattgcctctgagatgactcaaaattgcagacagttcaatgatcatctctggttccttgccctcgtgatcaacacttttatcagaccatttgcatcgcccagaagtccatttcatcgacccccttgagtttccctctcattttccacgctcgctaatgtcgtttatcattagggcaggctaacctacaatttccatactgctgggccagaaaacgtatttatgtataaacatacctatatttaccacaattttctacacaattttccctaaccattttctggca
PCR verification status
Line verified as correct.