| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT39529 | chr3R 6393774–6395983 (2209 bp) | hth, mir-4944 |
      active |
epipharynx primordium, hypopharynx primordium, clypeo-labral primordium | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | not active | 0 |
| 9-10 | hypopharynx anlage | 2 |
| 9-10 | clypeolabrum anlage | 2 |
| 11-12 | epipharynx primordium | 3 |
| 11-12 | hypopharynx primordium | 3 |
| 11-12 | clypeo-labral primordium | 3 |
| 13-14 | epipharynx | 3 |
| 13-14 | hypopharynx | 3 |
| 13-14 | clypeolabrum | 3 |
| 15-16 | pharynx | 3 |
Whole-slide images
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0001235 | hth | overlapping | BDGP FlyBase iFly |
| FBgn0263547 | mir-4944 | 54920bp downstream | BDGP FlyBase |
| FBgn0264788 | CR44018 | 71227bp upstream | BDGP FlyBase |
| FBgn0266260 | CR44955 | 103075bp downstream | BDGP FlyBase |
| FBgn0266244 | CR44939 | 105975bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
ccagcaggatcccgattccgattcgcagtacgattccgatcccaaatcggacacttcgtggacgtttccctgtcagcagactaacgcaaatcccagctacaacgacgctcgcattcgagagacccaaacattttcatttcgcaagcggggagatttcatagattgcattttgcaagtgccccaaggtgttggccaacttatcgcctcgccggcttgttccttttggcccggccgataagctgacagctgaaattagcccgactagaggaaacatgcccagagacgaggcattacaaggatttgtcgctgtctggcgagtcatgcctcaaaaaaatgccattgccagtggttgtggtgctggtggaatgggcggggttgtatggtacggtatgtcatgccctctggaagcccaaaagtgtcgagtcacctcgacgggcagcataatacgaaattcatacagtattattgatatgaacacactgataaatggcccagagtgactcaaatgtagatcaaagattcgcgcgagctacgcattccaaataaactccccagttccctgttagcccctttcaaataggagagtgttacactgagaaaagcgaaaatattctttaagttgagagataatacgcaaggtaaaattatggtgcatattcaatatatctatgaataaaactgtttaatcaaacagaatgataggtttgttgacaatcaataatcatataacttttttattgatttggcttattgatcaatttaatacaccaatttccctcagtgccatgaaatttctcatctgaatgcgatctgaacactcttgttttgaattttagcccagtcatctttgccgcgaacttcagcacggcgcttttgagttctgtgtattatttcattcttctttttttcccctttttagagacagtcttttgaatagaggggcggtcgagtctttaaaagcctggcctggccaaaagtgtcgcatcatggccagtgcgagcagcagactggaagacgacgtcgccatggccatgacgaggcacaagttccgcccctcgactcccagagccaacattaccattcccagtcccactcccatatttcccccgaaaagccactgcctgtgcctctccagaaataagtaagagtacttaaggttgaatcatgccggccactgccaaatcaattagacctggtcgtgagcctcactttttggccattactcgccgctttgtcagccccgcagagggccataaaaattagaaaatttgattattgcaacacgaagcgttgcccgagattgagtttggttcaagtcagagtagcaggagtagcatttcggaagtgaattggaatggcgacctggtaggcaggacgtcccactgggccgggccatttgcatattatcatttggggggggcaaaagatgctctggttaaaaatttcattacccaaaccctcgaatccggacaaccgaaaaaagcacagtctaacggtagcgatgagtttaaatgagtttattacatcttttggcgccttttacagcatttagccgggcatgtttggtaaaaacttttcccgaccgaccaaaaggggtgtgcgataatgaaatttccatagatttgcataaaccgagagcccccaagcgactcgagtcagtcagcagagtcagcagtcagccagtcagccagtcaggcagtgaggcagtcaggaggagatgccctaaattagataatgtctaaattggatttaaaacacgcattttgcgggtttccaaccaacacccattgaagacccatcgagacaacatcaaaatatcattagaagccagtgcttttttctgcttttctgctgtctgggcatttgaagggttgctctctctgatttgtatgcaaatgttttggctggctggaatgaaatttgattttccatttggtggaaaaacaggtgccagacactcgctctctcactctttctctcactgtgccactaagccgattataaagcgtaattaaattacgctggaaaatcatatggcggtgatgaagtaaagtacagaaatgtttcaattataaaaaaggggtacatttttagtaagctaagctaaaatgtgttaagagtttaaatagttatatctcgacaaattgctacaaatttttttttttttggttttaaaacccctttctaaacactatattagttgggtgaca
PCR verification status
Line verified as correct.