| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT39535 | chr3R 6404264–6406474 (2210 bp) | hth, CR44018 |
      active |
hindgut AISN, A-P stripe, head epidermis lateral primordium broad | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | hindgut AISN | 3 |
| 4-6 | A-P stripe | 3 |
| 7-8 | not active | 0 |
| 9-10 | not active | 0 |
| 11-12 | head epidermis lateral primordium broad | 3 |
| 13-14 | head epidermis ventral subset | 2 |
| 13-14 | head epidermis lateral subset | 3 |
| 15-16 | head subset | 3 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0001235 | hth | overlapping | BDGP FlyBase iFly |
| FBgn0264788 | CR44018 | 60737bp upstream | BDGP FlyBase |
| FBgn0263547 | mir-4944 | 65410bp downstream | BDGP FlyBase |
| FBgn0037818 | CG6465 | 97018bp upstream | BDGP FlyBase |
| FBgn0037819 | CG14688 | 99195bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
cctcaggtgggcatggcaaaaaaaaaaatacaaaaaaaaagaaggtaaaagcctgggagaggtgctgcatttgcctaatgacacaaaagtaaaccgtccaacggactttgtataatttccctcgccttttcgctaagctcttaaaccgatttgcagcttagttgaatgtccaagagatagaggagcttcggtgcaaaaatatttcacaaagccaaaaacgcaaaaaatgaaaccgaaactgtgtgttcattggaaaaaatgttttggtccaagacaaagagtgtgtgttttttgttgctggcttgtcttgtggcatttttacggcataaatttccattgaattgatactttttggccggcaccaccaccaccaccaccaccatcgcccctcccgcaatcatggcaaaaacgtaagcagcagggccaacaaaaaaaaagggttgacacaatcaggtagagtattcctcctgtcggccgccgtcctttgaaggcaacaacacttgagcagcgaaatttcattaagatttcaaaaatgttttttggccagtttctaagatttcctggaattgagtaaaacagttaaatggacaaaagatatattccataaaatgtttacgactaggagttaacattgtgtggcaaaagttttcattaggattaagcctttttttcatttcagatatgtagttataaaacaggagagccgtcagtttggcatgtcttttcacgccgcccaaggattttggtgacccaaaaggtatcgcattcaacgctttcagtacgtgtaattcccctggcaaaaccaatccaaattctggtcaaaaaacttgccgttgaaagctaacaaaaaacgaacatcagatcagccgcagacgaaatcttgtggcaactgcattgaaacattagcagtgatgacatttttgcggtcaccacccctctgtccaccacccaaaaaaccgtctgtggatcgtctgcctttgttgcttttgttggttgtgcgatggagaaattcctgccaacgcgacacttcatacataataacaaaagatcgacggatcacaaaatcgtgaagcgctcatgactttgggtttcgctgagtaccctgtatttgtgtggagtgtattagcacggcaatcagcttgaagttgtgtcgaagaactgttgtccgccaacgtaattcatcatatataatttgattttaatttaaccaatttgtcttaataaactcatttgggcacatgcattttaaatgtaacacaggggtatttctgaaccgtttccccctgcaaaaaggcgatcaaaccttgtggatttttttcgggcatttgtagggcttttgcggcctgttggtttattaattgtagccttggacttggcgatggtccctctttgtttcacaaatgaatgcacaaatttcgggacaagtctgctctgcggtttcgtttgtgccacaaaacgcagacagtatgacgacgccgaaagccgcaagagtgaaaaacaaacagaaaaaaaaaccgcataaaagcaaattataagaaagaaatccttttggctaactcgtatttcggctcaaaagtcttcaggtgagagtgccgctaatgagccaaagccaaaaaccccaaaatcttcgatcctttgctacgtatttctcgtacttttttgtccgagtttggtttttattttagcctcggaccaggcctggtcttcgatttcaaaaccagttggtcagttttgggaaagggaatggattgtcttaatgcctctaaaattataggttacttcgcgcgctgcttggaaaattgtttgcttttgttttggggcgttgctcgagaaattaatacaaaacccaagccacacgaaagagcattttcttcggtggaaattccttttgaattggtttgactttcaagagcccagaaacacgcccagggcaatcacgcaaaatgccaaattacatgtagccaccattaagcgaacgaactcatctaacacgcacccaaaaaaaagccggggaaaataagcccagccgaaaaaaaacagagtcatttaaggtgtttcacacacgttctttccccgcgtggcagctgtctcatacgattcgatacgatacgatcgggttgggctgggttcactgctcgaatttcagagtttctgagatctggcgcacttatccagtgatccctggcagcacccccaattttctggatcgaa
PCR verification status
Line verified as correct.