| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT39540 | chr3R 6414986–6417256 (2270 bp) | hth, CR44018 |
      active |
dorsal epidermis broad, posterior endoderm anlage, malpighian tubule primordium | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | posterior endoderm anlage | 1 |
| 9-10 | posterior endoderm anlage | 3 |
| 11-12 | lateral epidermis primordium subset | 2 |
| 11-12 | malpighian tubule primordium | 3 |
| 13-14 | ventral epidermis subset | 3 |
| 13-14 | malpighian tubule | 3 |
| 13-14 | dorsal epidermis broad | 4 |
| 15-16 | head epidermis subset | 3 |
| 15-16 | trunk epidermis subset | 3 |
Whole-slide images
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0001235 | hth | overlapping | BDGP FlyBase iFly |
| FBgn0264788 | CR44018 | 50015bp upstream | BDGP FlyBase |
| FBgn0263547 | mir-4944 | 76132bp downstream | BDGP FlyBase |
| FBgn0037818 | CG6465 | 86296bp upstream | BDGP FlyBase |
| FBgn0037819 | CG14688 | 88473bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
tggctgtgtgtttttgtttttgtcgttttgttccttgcatttatatatttattttatacaccaaaaatcgaccgctgcattttgttggctgcatataaatgagtgtgctttttatgctttatttttttttcagttcgattttacgttttttagtacaagttgctacagttctttgttggtttcgtgtgtgtcgcaagctgtgtgagtgacaaatgacaaaacaaaaacctgtcgtggtctcggccgctgctgtgatgttgataaagatcttggctgttttagttttttttttttttttgctcggttctggctttttatacagggtgcaaccaattgcagctggccaactgactgactaacttggcttactgctctagttttgtgcttttgtttgctttcgcgggcttagaaagcgtttggtgattagccactaattgcaccttgattgactcttcttcgttcgattccttttcgctgtcattagcccatatatccatggtctctatgctgccgccacaaaaagaagccgacaggcagtcgctgcattccacagcaaacgactttgggtcaagtgcagggccaagatagttagtgcattatggccagtaatctggcatcaggcaagagttaaatcttaaatgtgtatttagattactatcggacttctaaatcgatggtatccatgttcttcgtattttaaacaatctccattaatgatccaccagctccactccactatatattccccgagcgtttcgccttgttctgcttcggttttttcggttcgtgtagaatgttttgcataatttcttacttaagacttaattgaaaaaagagtgaagagcggctttcggacgggttttctggccggcttagctctcagtctcactgacttaaactccggctccggctctgggtttcggtttcagtttcggtttcggtttaggtttaggttcgctccacgcttcgttgcgcatttgcctaattaattttctcagcacagcagcagcaacaaaatacagcaaatacaacaaatgaaatacaacaaaatacagaaaagagggggtttgccggcattaattacgaccacgtttgaggaacaacttccattaagtcacaggctgggagacacgcacccgaagttgctgcttgcatattatttgaaattaaaacaaattaggcaacctgtaatttttccatttagacaataaagtgtctaataatcaagtaggtgttgtggcagcgagaaccctctcagcttaaaacctccccccacgcattcaatttactagggaaaataattaatgtgactgcgttatctagaaattatgttagaaaatcgtggcgagagggcatcacacctcatgtatcaacaacaaaagagatgccgaaacctgaatgcattccattgttttcgaaaaaatttgcctttttccgtctctgttttatcttacgcatgaaactgtaaccaactacagaaaacacctgccgctggccaaatatttgtggtctaggcccacatcctgtttccccttctgccccgcaaacaaatatttcactttgattggcaattaattcaattttcagttgcattttttttcttcttgctgcattgctcctttaatttagacattttgcaagtgtattagaccaactgcatatatgtgcagaaacatatatatatatatatatgtggccgcctgctgggcaactatacatgtgtccccttggccccgtttcaccccctttgcaacatggctcaataaaatgtcaacacaaatgttggtaattgaaatgcgcgcccgttggcaactatttgcctgcttttttcgccccggcgttttggacccggttttatttatgggcctgccggctggagactgtgtttttgggtcctgggttcctggttaaacattttgggtggtctttttggggcgttgataaatgattgccgacgactgcgacttggcccggcttgccactctggctttttcagttaattgcaatgactaaacaaatgctgctttttctcccgcttagatgaggttgcataaatagactttgatattgaagctatggcaatgtttaagctgacttaagtggcatagttaaagtaagaaaaattactggaaaatcgttacttactttttctaattctaaaaggtgaaaccgaagtacttgtattgcttgcaccatctgtaagaaaagaagaagaaattcaaatttagtaaggtaaaatacaagcatgtaacattggagtgaccacactca
PCR verification status
Line verified as correct.