| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT39544 | chr3R 6422000–6424236 (2236 bp) | hth, CR44018 |
      active |
posterior endoderm AISN, dorsal ectoderm AISN subset, posterior endoderm anlage | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | posterior endoderm AISN | 3 |
| 4-6 | dorsal ectoderm AISN subset | 3 |
| 7-8 | posterior endoderm anlage | 3 |
| 7-8 | dorsal ectoderm anlage subset | 3 |
| 9-10 | posterior endoderm anlage | 2 |
| 9-10 | anterior endoderm anlage | 2 |
| 11-12 | malpighian tubule primordium | 3 |
| 11-12 | trunk mesoderm primordium | 2 |
| 13-14 | epipharynx | 2 |
| 13-14 | somatic muscle | 3 |
| 13-14 | malpighian tubule | 3 |
| 15-16 | head subset | 2 |
| 15-16 | malpighian tubule | 3 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0001235 | hth | overlapping | BDGP FlyBase iFly |
| FBgn0264788 | CR44018 | 43001bp upstream | BDGP FlyBase |
| FBgn0037818 | CG6465 | 79282bp upstream | BDGP FlyBase |
| FBgn0037819 | CG14688 | 81459bp upstream | BDGP FlyBase |
| FBgn0263547 | mir-4944 | 83146bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
ctcaggcaattatcggaaaggcgagacgcttggaagaaagcgaaaactgagcaactaaatctgggttcataaaagacacaaaataaaagcattcattccagccggactatattcgttttataatgccaatacacacggttgggcatgattttatggccaggtcgcttggctataaaatcattccgagccagcgaggagatagccccggactagggacaatagtacggccggttggttatacacatacatacatccatacatatgtatgtacatatgtatttgctagtctgcaggcacttgagtaatgtggtggctgttggccataaagcccccactcccagccagagtttttagtcccgtaccaccggactgggccataaagcaatttatgcaccaccgcaccaccgacttttggaatcagcgcacagtagccagcattttgagttgtcgctgccgtcagaagccgcctgccgatcgctattgagcctcgggcccacttgagaaaagagtgcagtgataacagtgataacacggcccaataccaaggaaaagggccggacaaaaagattcgcaagaggtacaaaaaaggcgggaagggcccagtttaaaaacaagtcatcggctgtattgaaaagcataaactttggccgactggctatctctctcaaattaacgaggcttatcgataataatttattttgttagatatgctaataaatatttttccattaattaggtgtaagctatgaacccgaaaagttcaaagttcgacctagaacgaagactgcaactactatccctggagaatcccgccctattaatagttgatctaattgcggagccaaaagtcagcggggtatacgaaaagcgaggcgcctaaattgcagcacgtagccgcattttattattttcatttccatgttgcgtgccacggcgccagccgcatgcgggtttccctgccccttttcaacattactataaacaaacagagagaacaacatatatgcgagtgtctgttatcaagatttttaactttggcccgaggaaaacaaaccaaattaaagtaacagcccgaagaggatgcagatatggccgagagacatttttcataaactcggctaaaagattatttctatttccatcggggaaatgagtatcttgtctagacccgaacaaaagttgtgaccgcaaaaacatagttagaactattgtatgtatctttgctcagtcagtgcaaaactgcacttacctcaaacagtgaaaaaaaaaatcaaatgaaactagacccaactcgaaacgagacaaaaccatatcgggtttctcacacctacacaatgggaaaatggaaccacgcttaggtgcctaaaagcttgctcaatagccaaaaattcagaggcttaatcgtgggggtaagtcccattggtaatattttataaaaatatataaaatgtaagtacaataacaattgtcataaatcacatacacaacataaatgcgaactaaaattttcaatcaaaacactattttataaccccctttcaaaagctttgcgcgccgcccttgtgccgcagcccactcataaaaataacaataatttcgttgtaatacaaaaccgaaatccagcaggaaaaaaagagaactttatttgcttagccgatgacgatgatgttggacttgtttaatgtcgttgattacttttacccggcatcatcaacaaacacaagtagagcaacaacattggtcgagcgagtgcgttgtcatagttgttgttgttgttgttgttgttccatatctatatctttataatgggcgcacaatatcggtagtaaaacggccgcaattgaggtgacacaagcagagactagaaacaaaaccagagacacggcgacccccaccgactgcttctttttatagccccacaacctcgtacccctccggaatgaagaagagcaaagtgtgggtccccgggagatactccacttcagatacttcagtttacgacccaaaggtaaactcactggggcagctaccgctcagatacactacttctaacgcgttttgctgtaggcaaacacatacggtaggaaagaaaaaggaaagagctctgcagagacaatgtcaatatttgcattggccaagagatttccctgcttacctgaaccaaaaagaaaatacacgaatatggctgaaaataacagaaaactagagataattgttacgtctgcgcccaaaacatc
PCR verification status
Line verified as correct.