| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT39546 | chr3R 6425535–6427699 (2164 bp) | hth, CR44018 |
      active |
A-P stripes, trunk mesoderm AISN broad, ventral ectoderm AISN | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | A-P stripes | 4 |
| 4-6 | trunk mesoderm AISN broad | 4 |
| 4-6 | anterior endoderm AISN | 3 |
| 4-6 | ventral ectoderm AISN | 4 |
| 7-8 | ventral ectoderm anlage | 4 |
| 7-8 | procephalic ectoderm anlage | 4 |
| 7-8 | dorsal ectoderm anlage broad | 2 |
| 7-8 | trunk mesoderm anlage broad | 3 |
| 9-10 | ventral ectoderm anlage | 4 |
| 9-10 | head subset | 3 |
| 11-12 | head subset | 3 |
| 11-12 | ventral epidermis primordium subset | 3 |
| 11-12 | trunk mesoderm primordium | 2 |
| 13-14 | somatic muscle | 3 |
| 15-16 | head subset | 2 |
| 15-16 | somatic muscle | 2 |
Whole-slide images
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0001235 | hth | overlapping | BDGP FlyBase iFly |
| FBgn0264788 | CR44018 | 39466bp upstream | BDGP FlyBase |
| FBgn0037818 | CG6465 | 75747bp upstream | BDGP FlyBase |
| FBgn0037819 | CG14688 | 77924bp upstream | BDGP FlyBase |
| FBgn0265161 | CR44230 | 82819bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
tcgaagcagggaatattgcacaaaagagattaagttccttttcttttcttttctttgatttttttctttaatttttggactccgagaaacgcaaatgcgtagtggagaaaggcgatgacgacggacgggacgagcagagatatctctcctacagagatccctcggcaaagtgaacattccaatgaggctgagactatggctgtgcggcgcgatgcggtgtggtgctcctgctgacaatacaaatacaacacaaatgcgaagcgtaacctttcatacctgattatgaaccatcctcctccgtttcggatgaaatcagaaaatgcaatttacgaaacaaaaaataaaaacgggagggggaacggtgcaggggaactgggaaaaggtaagccggtaaattgccttttgtagggaaaacccagccgtttgcatgtggatagtatacccagaaaaaaccgaaaagtcccgaatacattgattggcattagggcttaacctgttcggttacggttagaagcctgttacctgctttattcgtttggttggtcagcttgaaatgttgtgacagttgttaggcagccagacaaatgtcaaggacggccaactagaggcacttcattaatcatcccggatcttccgatctgccccggctgcaacgtgcaacaaatcaactcatcgcatgtccaaactattagcaaaatgtcatgaaacgagcggattttcattttaaattacatacttaaagtgaaatcatataaaattatctgcacactcagacgggccatcctttgtctcatttcgggaatcctcaacaaagaaatgatcagacaacgaacttttcgctgggcattttatttatatatatatatatatatatatatatgcagaacggcgcttcttatacttgttcttgttgtggtctttatttttttgttcatcatttgcatcacatgttgctggttttaaagagaaattataaagcgtttccttagctgcatcattagcagcgccaacaccaaaagtcgcctaactatgcccgccatccagaaggggatcttaggcggagggatcagtggatatggggaatatatgtgggcactgggattttgggatggtcttcgagatactatagggaaaatatcaccctgttgctggcgttggcgtggcgcattttacgcagttgcttagtccaaattaaagtgaatgtatgtatagcatagcgggagagtgccaacgaagagatatatctatgcaatctatctatataaaatgcatcggcatcatcatcatcatcatcatcatcatcaggagctgaagaagcagaagccgatgcaggagaagcaacaactgcgccaacagcaactacgagtaaaaaagtgccaatgtgccgccttatttttagcccctcttctggggcgacgacgctcttttctccgctgctcgtttgttaaaattcgatgggcgaatgacatttttgagttatttttgtcagtccgacaacgacgaaaacagccaagagctcggccaaaaactatactgaaaactcaacggagaccgaccgactgaaccgaggaaaccaagaaaaaccgagtcgaaaaccgaaataaaaacgaaatgcaagcgacaacttagttgttgacgttcggttcggtgaatgatcaacaaatgtcaaccgcgagatgggatcattgcagatcgttatgcagaatcgaaagatactttaacttttgggtgcgactttgggttggtatgccaaatgtagaatctttaattgtaggatcccaaatgttctaatagtatcaacacttttcttatgtttcatcgactgtcaaattttccaccttgatttgcttattggcgttgccagattttttgaatacctcaactttatgtgagatttaactgacaatctgacataagtctatcaaaatctcacccagccaaaaagccaaaggcaggcggacagatcttgataaatgtggctcgactttaagacgatgattcgagtgttgttttatgttgttcttgcggtcgctgttgttcttgttgctgcccgttttattgcccatagcagcggcctgtcaaaattccaaatggaccataaataagaacatcatttttataatattcaactgggggcgtcgctggttgcatttgttgtttgccaa
PCR verification status
Line verified as correct.