| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT39571 | chr3R 6469578–6471768 (2190 bp) | CR44018, hth |
      active |
ventral epidermis anlage subset, ventral epidermis primordium subset, anterior ventral nerve cord subset | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | A-P stripes | 2 |
| 7-8 | ventral ectoderm anlage | 3 |
| 9-10 | head subset | 3 |
| 9-10 | ventral epidermis anlage subset | 4 |
| 9-10 | dorsal epidermis anlage subset | 3 |
| 11-12 | lateral epidermis primordium subset | 3 |
| 11-12 | ventral epidermis primordium subset | 4 |
| 11-12 | ventral nerve cord primordium subset | 3 |
| 13-14 | head epidermis ventral subset | 3 |
| 13-14 | lateral epidermis subset | 3 |
| 13-14 | ventral nerve cord subset | 3 |
| 13-14 | brain subset | 2 |
| 13-14 | anterior ventral nerve cord subset | 4 |
| 15-16 | ventral nerve cord subset | 2 |
| 15-16 | brain subset | 1 |
| 15-16 | anterior ventral nerve cord subset | 3 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0264788 | CR44018 | overlapping | BDGP FlyBase |
| FBgn0001235 | hth | 4289bp downstream | BDGP FlyBase iFly |
| FBgn0037818 | CG6465 | 31704bp upstream | BDGP FlyBase |
| FBgn0037819 | CG14688 | 33881bp upstream | BDGP FlyBase |
| FBgn0265161 | CR44230 | 38776bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
gccagtccgagaacaaacaggaacagaaaatccatggggaagccataaaaagggtagtataacgattaattttttccacgttgacattttagcttaattgcacttcaataatcccgaaaaaataagaaaaaaaaagagagggcttaaacaagaacagatacaaggctaaagcgaaatggcaaaaatgcgtaaaagggcatgaaaagcggcagccgacagagcagatacaattttaatcccacggacttttgctgcataagcactggccgagaaaaaatcagcaaaaaaaaaacaaaaaaaaaataaaataaaaaagtatcttgagggcttaccaaagagaggggagtgcagggaatccgagtccgaatccgaggcacgttgtcagcagaagctgaagcagaatcaagccaagttgcaagtgggctgcgaccccaaaagcggccaacagcagtaccgctaacaaagttgacaagaagtaaaatgtccgacggactaattggcttaaacgctggcaaaatttatttaagcacattagtgggatttggtttttgccatcgccatcgccaacgtttgcttgtatccgtacatgttgtttgtttctgtgtatctttcggtctgtgcatgagtgttgacccgccatcgattcacttgattcacttgaccagctggcttttggttctttccacatgacaataagtagattgactaaaactgattgaagcactttccgttcttttgtggcgttcattagtaagaaaaaaggtgcattaacttgtgtaaattatttataaagttaaaaacatcataaagaaattcaatttttaagttataaaatttacaattaatataattcctgtagtgtactgtgcattataataaccaaaatccgtgatttataggattttccgaaaaagaggaaaaccccattgaattcccggccaatccattttaattaaccccaaagcaattgtcacttttgctgtgaatctgggcaaggcataaatcattcagcccaagaatccccaaccaaattttgaagccattaaggcccaccccttaaccctcagcccagaaaatcccgtctctattttcccctcttacgcaactttttgtcacatgcacaaaatatgcggatcttaccttttttatttaattagctaatttcgagtgaccccagtaattggtggggatataaataattaaagcggctgatgggtagtgcaaagtgcaaatgtatctcacggatacgcagctgagctcgatacatttttaataaagtcgagaggagcgagcgttcttaaattattcaaaatgctttgctggtacctccatcgttccctggtttttagaaatgtcgtttccaattttactccagcatccccacaaaatggatctcccctacgcccaaaagtagtttcatctacgaccaggataccccaaaaaaaaatacaaaaaaccaaatatacaaaaacagcaacaaatttctcacgctgctcggatgcgaagatttaaagatttgagtttcgattccgatttcgacaacgaatccatctttgagtctatctatgtggctcgaccccaaagtcactttctcccgttgtctctgtgtgtatacatttcacaccctcaaaaatagaaattatctttgtgcatttacgcaagtttttaatgctattagttccatcttaacatctcgggtcttttcagataccatcctccatccaccataaccatcccatcccatcctgaatgccatccgaagtgaaccaaattgtctgtttctgttaccgtatctatatctctggatacatctccgctctgtgtgtcctgtgtgccttttatttcaattctattttctatacactcgctcgctgcgttgcactcaacaagagcgctggtctggacgcaattttgttggcaataaatcacccaaagtcgacattaaatcttttttcccttctttcattattttcttctcggttttccttcttggcatttgctttccctactttgcgtttgactttcacacaaacagagctcattgcacatgtctcggggattacgattggaccaaatcagggtagcagtgtcctttcgatttgttccttttttgtttggttacactgagcgagaaaccgctgaagttaattggacatccgtctcacatatacattctgtgatattaattgca
PCR verification status
Line verified as correct.