| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT40419 | chr3R 8092893–8095014 (2121 bp) | svp, CR44039 |
      active |
trunk mesoderm AISN subset, trunk mesoderm anlage subset, ventral nerve cord anlage subset | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | trunk mesoderm AISN subset | 4 |
| 7-8 | procephalic ectoderm anlage | 2 |
| 7-8 | trunk mesoderm anlage subset | 4 |
| 9-10 | brain anlage subset | 3 |
| 9-10 | ventral nerve cord anlage subset | 4 |
| 11-12 | brain primordium subset | 3 |
| 11-12 | ventral nerve cord primordium subset | 3 |
| 13-14 | ventral nerve cord subset | 3 |
| 13-14 | brain subset | 2 |
| 13-14 | dorsal epidermis subset | 1 |
| 15-16 | lateral epidermis subset | 2 |
| 15-16 | ventral nerve cord subset | 2 |
| 15-16 | brain subset | 2 |
Whole-slide images
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0003651 | svp | overlapping | BDGP FlyBase iFly |
| FBgn0264831 | CR44039 | 1613bp upstream | BDGP FlyBase |
| FBgn0038009 | CG17738 | 3719bp upstream | BDGP FlyBase |
| FBgn0264829 | CG44037 | 4293bp downstream | BDGP FlyBase |
| FBgn0264830 | CG44038 | 5942bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
tgtatcggcggagtaggagcaattcatttggaatggtttttcaaattaccaaacttgatatctcgagttttatgatgatcgtttgatggaaaattgtaattaatatgacatttatgacttaagcagctgaagttatagaagatacaaaaactttgaaattgaatttacgaatttctttttgcaagactgtactggaaactaaaggttagtatagtgccatttttcattctgggctgtacgcgcctttcactcggttaccacccttagaaatgtcgcccaagagtctcccgaccatatatatgcaatctcatatgcattactttgcatgtctggcgagttaaggaactcaagcgtaaaggtcaaaagatcaacgcttgaggggcaaaaatggcagggagggaggtttttctaaagaatttccctacttttcctgtgttaatgctctgatttcgtttccaaaaatgtacgcagcatttgcatttgcccattgtccagttcgctgattaggcgtgaagttcgggatttgaataagagcattactttgtgtaatgtttgtgtgacagaatgcagttactttttttggcgggaaaaatagggtacactcgtagattaatcaaaggaaatgggtctcagtttttaggtaaactaaaatgctgatagaactttcttaaagattttaaaagtgatgcaatatgcgacggcttttaatataattgcttccaaaacttaatctaacaaatttattaaatctacaacaaatatgaaaaattagatcttaaatttctttagttgtactacaatttggctaaagatttggccaaagattttaagccacgtaaattaatttgagcctatgtatacttacaattaccgcacgaattaagaatgcttatctgaaacccacttctcaagcacactatattccagaagttttcctaagaatctcccaaaaaaaaacgaggtcagcacctcctaattaaggtcactttcatcccaaatccctagtccatcaattcttttccgagcaaacagccttacaacacgttccgccttattatgaccatgcgaacaaagaacaataaaaaacagggcaaattttgccgccaccccagcgggcaggcctagaaaaaaataacacttaaaaaatttgcaaacatgttttgcatacagcaaaaccgatcatcaaatattcacatgcaaccgacgggaatcttaggtaaattttcacccagaacctacacgcacccaagacaaagccgagaaaatgtatatccagaatgcaaccaccgatctcgagatatccagctgcttgagggacccacgtcacgatcacgattgggacagatcttttgtgcaaactggagcgagcgaatgcgagtgcgaaaatctaccccataatcccagggaaaaacccgaaattaaacttggccggacaaaggaaactcaaatgtttatttgcgtatcgaaatgtgcaaatttttcccatttccaataccttgaatattcataaatctcttgtcgaaaggtacatttaaatactccatattgtttggcagagaaagcgaaaatggggaacggcagtgagaattctttccgctcgaagtccagttaacagttacgctgacatcacctgtctaaatcaagtggctagtccagctagtctaacacgataattggtgtcataaaagttagttaaatcatattggatgtcagtcaaatcgctggtgacattcccaaattagaagaagtcggtggggcggcaactttattgcgtggtgattgccacggccattgtttcgatgacacgccaaatggtttctgtttcgaagaccattccacctgtcagccaaatggacagcaatccgaacacacaattatctgccaaatgacgagggcgtgtcaggtggcgcttaccattttggttcgactatatatgtattttgtatgtatgcatggtctatatacttcccggtgcccagcaataatcacaaatttacagctcgtcggtgggggacagcgttatgccatttgatgtggacttccgattgtagcaattatatgtaaattaattatagggttcagattggtcctaattgagacttgccttgctttccagctccaa
PCR verification status
Line verified as correct.