Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT40575 chr3R 8404566–8406789 (2223 bp) Octbeta2R, mir-284 activityactivityactivityactivityactivityactivity
active
mesectoderm anlage, ventral midline VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10mesectoderm anlage3
11-12ventral midline3
13-14not active0
15-16not active0

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0038063Octbeta2Roverlapping BDGP FlyBase
FBgn0262383mir-28427231bp downstream BDGP FlyBase
FBgn0250910Octbeta3R30616bp downstream BDGP FlyBase
FBgn0266247CR4494240032bp upstream BDGP FlyBase
FBgn0005671Vha5544918bp upstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

gcctgctttctgatgtgctgactgtgacttgcactgaaagaaatcgaggtactgaactctttatatttaaaaaatattacagtttatatatttcccaagacttaaatgtaatagtgtacagcaaggtaaactcactgcacagagctctgctctttttccagacacgatttcactcaaatattgaaggatgcataatcctcttataatataaaattcttgtgggaaatcacgtcctatgataactgacaatggaatatcgatcaatggaatgaacattataattcctcaagcagaaaacgtgatatatattattatatatatagatgacaaacatttatttttctttgacagttaagttaacggcaattgtagttgctctttgatagagctatattgaaaccgtgttagccttatatgcgatattattgattaggtcgtgagttaaatatgcatagcctcttctggtttttgtggtgcccaacagaatcccttttgggcaatgcaattttgatgagtgcagtgaaaaaaaggggggcagggcgagtcaggcgccacgcctggtgtggcaggtgaggcagctgggcgcagtgcagcgcataaaacgctgtcgagagcaggggcgtggcgtgttgcacacaaaaaggtcctgcgaaataggacgagggtggggtgagtgttggccatggtggctacactctgtattcggcaacacctggccgacgagatacacaccgaactgcgagatgctgctagatgcgccgagatacattcatgtgcgttcatattttacagttttgcagttagtcctgcaatttatgcacaacaaggggcgacgaccagcccaccaacccacttcgcccagcccgccatgggccagacagagatggcctgcagttggtggtttcagtttgcagtgaaaagcgttgtacttacattgaattgcgagtcggccattcagggcgggcctttagaatgccgttgccacctgagattgctggcgaatgcaagtgcgaatgcgaatgcttgcggctggccttagttgaatttaaaagatttttcctgacttggcattaaattactttcatgaaaatgcctcttaagccgcttgccaaagcgaaggacctccaaggcaaataaattgccgtaaattaaattactgcggtttgccctccaccccaaagagcatagcacataactgaagaaagcaagttagttttgaacagatttcaaacgaaatcaatttgttttgagctctgaatggcgattttatgggccaaactgtggtccttggtcaggctttcagcgtaattgcgctcctttgtcgccactgtcatcggtcggtcaacttcactttacggcccgcgggcactgcaatcaaatcaggaagacgccggtcgagagtgtcatttgcatgcaaatattacatttatatacatacatatatatgtatgtacttctttcacatttttgtggacaggtttggcagcaggccgaaagtggaggcaaagcaaagtatttccagatgagagcatgccgcggctttcagttcaagttgaaataaaaagcccttcaaatggggtggctaggtggtaagttggttggctggttttgctgccacgctcatttcggtggcagctcactcttgccacgcgaaatttagtaagttaacggcccagcaaggaccccctcaaccaaacaactcgcactcactttcgcggtgtgcgatggtgccggggataaaaataaatataaacactcgacgagacagccagggataatgcacataaaagagcagtctccttgcagctttgtcttcctcacttttccacttcggatttggcacacaacccactccatcacaccgcaactcaactcaactcatctcatctcgaataaactcgacactcgcagcggcaggtgattataacgctgccaacttggctcgacttgtatatatgtgcacagtatttgccagatctgctagaatgtcgagaattatggcaaataaacagctacccacccacgggggttggagcaatagaaaatctagacaagaaactttgggtaagttagaataattgttttattggtattcaaaagattttttgtagattatgtggacaagaaatatccatataatattctattcaagttttccacataaaaataaaatgaccaaaaaatctataaataggaaatgaaatgcacagatttttgtattggc

PCR verification status

Line verified as correct.

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