| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT40612 | chr3R 8473805–8476580 (2775 bp) | CG6234, CG6753 |
      active |
head epidermis subset, trunk epidermis subset, trunk mesoderm AISN broad | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | trunk mesoderm AISN broad | 4 |
| 4-6 | A-P semi-stripes ventral | 3 |
| 7-8 | ventral ectoderm anlage | 4 |
| 7-8 | procephalic ectoderm anlage | 4 |
| 7-8 | trunk mesoderm anlage broad | 4 |
| 9-10 | ventral ectoderm anlage | 4 |
| 9-10 | lateral epidermis anlage broad | 4 |
| 9-10 | ventral epidermis anlage broad | 4 |
| 9-10 | brain anlage broad | 4 |
| 11-12 | ventral midline | 3 |
| 11-12 | ventral epidermis primordium broad | 4 |
| 11-12 | lateral epidermis primordium broad | 4 |
| 11-12 | head epidermis primordium subset | 4 |
| 13-14 | head epidermis subset | 5 |
| 13-14 | trunk epidermis subset | 5 |
| 15-16 | head subset | 3 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0038071 | CG6234 | overlapping | BDGP FlyBase |
| FBgn0038070 | CG6753 | 5602bp downstream | BDGP FlyBase |
| FBgn0038072 | CG6225 | 6494bp upstream | BDGP FlyBase |
| FBgn0038069 | CG11608 | 8051bp downstream | BDGP FlyBase |
| FBgn0038068 | CG11600 | 10108bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
gttcggtcgtggtgcgtggtagtcggatgagtagtgaataaaccccgtgaaaaccggagtcaaatcgaagttatagcaacagctgaaagtctcgagaacaggcgaatgcagctgtattccttatctacacatcccggtgtttcagtatctgtgtgcgcatcccgtgtttgatagtcttgctgtgccttgtgcgtgcgtgtgtgtttgtgcgtgttggccagttgatttcgggcccgtcaaactgggagcgacaacctaatcaatcagtcactcaatatggccagtatttctaagagccgcgccagcagctgctcctccagaaagaggctgcatctgcaaccgggatcgctgctctgcgtgatcgtcttctgcctgctggcttcgtgctcggctcagccaagtgagtatgaagtatgaatatagtgagtgtagtgggtatatctccacggagctgtggagcggtatctccagcacaggccccatcatcgtgattgtcgtaatcacttgcagtggctggtggctgctgcggtcgcatcaggcctttgacttatatacatatctgggggtctcctcatcgtcttcttatgatgcggtgtggctttatagcgattttccttgtctgctgggcttttgcttgacataattcaaaacgagcgtaattatgtctgtgccgcggaagagaccccccttttgcaaaaaaccccaaacggtggcacttgggtgtcatacttggtgtacttatgaatgcccatcggcagctgcatttcatgctcgccggcagcgtgcgaaagttcaataatgtttggtaacaggccaattgaggcggtcaaacacttcaaattgtgcgataaggagaagatatcgttgccccctttgggctgggggataaactcgggggagagtttaatgggaattgggtagcggcaataaaatttccgtagtctggggtgaacaaacccatatcgcattattaaattatcaacggacacagctcgaaattaaaggatcattgatcatatggcgtgctgccatgctgtgtgttatgtgttatgtgttggacatgtaatttctctcacttaaacagcacaaaacataattccttggccacacccatcccgaattaaaggaactgacagctgacactggcctacatctagccgaatatatatgtacatatgtacatatatcgtacatctgtatctgccatctggaactgcaactgcggcaaactgcgtagcccagccgaaaagaaaatcgatttatgcttgtatttttcctttaaatgccattttcctcatttggccgcctctttgttttcgtttgtgcggcatgctttgtcccattttaagacccaaagacagtttctgctgatattgtagctattcgttgttcttgggcattcgatgcgttcccaagggatttggaatggaaattggtcatgggcatgggcatggaccgaccgcccatgcatatctcatgcagagcatctaataattccgattttccacgaaacgagttgcatcttagggacagggattcactggatggggggcaggggaatggaatagatgtcccctcataaataagtcagctactttataggcacacaatgcgacaggctgggcgggttgcccggtctcgttggtttgtttatttggttactaatttgggattcctcgatttgttgcttggtgtctgctgtgtgtgtctggaattttaatcactccgacctccatcctactcctcctcctttctcatccgtccaagtggccatgcattttgagtaatgggacgcgggcgtacatatgtacatgtgtctctggaggagaattcgggttgatcgagttgcgtttggctaccaggcgggggaatctcgacctgggacccagttgtgaatgaatgtgtgagaaaatgtgcatcgatgacagcgatgatgagccgccttgatgtggctatgaatgggccgtatcgatgttgcggctcatatgtacatacatgtatgtctgtaatggataatatccagaaagatgcccatctataaagcattaagaatccatcgaaaaggcctaatggcactcgtgtggaatatggctgtaatatttgtttattagcgcgttaaatgggaggtttatcaatgtagcggttcgtccattaacatcgttcgaaaatacattttattaatttccgcttttaaatgcattctgatactttttgggggaaagttagggaggagctctcaatattttccaagcctatttccatttctggttaagtacttgcgacgtgttctcagtttcttgggagaaagccgagcctagtcatcgatgtaaacttaattattcagaaagttcatcacgaattttcgatgctgtttcccaattaatcacacatttttttaagggtcatatttaattcttgttaaatactaaaaagattgttatttaacaagtatcaaaaaccaaaagcctgtgataacaattgaattggtcgcagagcgaatattttgtggtccttattatattttaatacaattttttttttaagaattaaattgatctgcactattttacattttattgacattttacattgagcttactcttctacattttacattaccattacatggggtgggtgtactggctacacaaataaaagcaactatgtgagacaacattggcgtaacaaatgtggaaaaatcgtaactattttgcacattttctcgttttagtcgagtcaacctcattgcctgcagaagtggacgatgtggagggta
PCR verification status
Line verified as correct.