| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT40840 | chr3R 8890077–8892275 (2198 bp) | sim, pic |
      active |
ventral nerve cord anlage broad, ventral nerve cord primordium broad, amnioserosa | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | procephalic ectoderm anlage | 2 |
| 9-10 | lateral epidermis anlage subset | 3 |
| 9-10 | ventral epidermis anlage broad | 3 |
| 9-10 | brain anlage broad | 3 |
| 9-10 | ventral nerve cord anlage broad | 4 |
| 11-12 | lateral epidermis primordium subset | 3 |
| 11-12 | brain primordium broad | 3 |
| 11-12 | ubiquitous | 2 |
| 11-12 | ventral nerve cord primordium broad | 4 |
| 11-12 | ventral epidermis primordium broad | 3 |
| 11-12 | malpighian tubule primordium | 3 |
| 13-14 | amnioserosa | 4 |
| 13-14 | brain broad | 4 |
| 13-14 | ubiquitous | 2 |
| 13-14 | ventral nerve cord broad | 4 |
| 13-14 | head epidermis subset | 3 |
| 13-14 | trunk epidermis subset | 3 |
| 15-16 | brain broad | 4 |
| 15-16 | ventral nerve cord broad | 4 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0004666 | sim | overlapping | BDGP FlyBase iFly |
| FBgn0260962 | pic | 7631bp downstream | BDGP FlyBase |
| FBgn0038115 | CG7966 | 12903bp downstream | BDGP FlyBase |
| FBgn0051157 | CG31157 | 15062bp downstream | BDGP FlyBase |
| FBgn0001217 | Hsc70-2 | 16966bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
gcgtgtggctgtgtgtttgtgtgtaatgctcgccgctcttcttcttccgctctcgcttgcgcgcactgttgttgtttgccgcagagggtggttgtttttggtgcgcttgtgtgtgtgtgtgtgtgtttgtgtaagttgtggaacccgttttccgctccccccattctcctgctcatctcggtctgttacactgaacaacagcatttgaaacagccaccaaagcagcacagccgtattgaaatggtcggtgaatgaaccatgcacagtgtcgatggttttttataatataagttttaaagttgttatttctatagctataaaggctttgttcttagtagcacaaagttttttttattgtctaaaacgatctgcccttctgttgcaagactaccatcattgtcggagttaaaaacattattattattgttattctctaattgtaatattttgtcaaagttttactgtaaaaagcgccttagctttatgagcttcaaatgactatcgatatttcgtatacgactagttgaacaaaaatgtaatgagtttatttttaacattttttttacataaacattacataagcttaataaataaatttcgaccttgagttaaatgtagtaaaacaaacaaaaggtggatccggtactagatcctgaagaggtttttaaaagaaatattgtgtttcaacaaaagtaacctaatatacttcctaccttaccaaagagactccatactttttcttgattttaaaatttctaaaaaaagatatgctaaaagtacccatttaaaatgctgcctcacgatcaagataagaagcaaatgctaagtggtggctttatttatttatttatttatgagatccccaacagaataatgttttaccaaatgacaatcaccttccgctcaagtgtcagcgacctttgggcatatctattttcgtgccatgttcgacagcacatgcaccactgtgctccgcttctaatgtctctaaaatgctacctggggaatgggactcgatctggaattgggaaagggactgagacaccattttcttgcgctcttaatgttgtattgctggttccaccatgccagtgtatgtgtgtgtgtgtctttgtttggcagtgtgagtgccgtgggctttggattgtttcctgtgcgctcgtttgtcgtatttctggtctcgtctaggatttgatgctttttaaattcttttgtctcgtacattttttgttgatgaatgttctgtgtgtgttgcacgttgggggcttgccttttctcagggggtgtttgttctgcttcctcttcttgctcctcagcatcggtgagtgtttatcttgggtgttagtgtgggtgccgtcctgcgtgtgtgtgtgtttgacttctagtgaggaaatccgcttaatgctgtaattttgctgcgctgtacaaacgaacacgtcaactttgatagtgtaaccatttttaagcaaagcaaatgtggagattcattcaactcgttatgctaatatgagccagaaataacccttttaacactttattctggaaaatagtgccactataaaattgatttaccttgtattatattatttcgtaaacgaaatgttcgataatgataagaatatggttcttgttctttgttcttcaaaaagaaaatatattttactattaatttatttgttatcaaaagattaatgtataaatgattatcataaaaaaaaaagatgtaagatagctgaatcttcttgagcactttattatcgcctgaccacaatatttttaccaaagagattaatttaattagtcataagcagtttatcattcgaaaagatacgcttcataaagtcacttaaaccgtagatgaaaacacagaaatctccctatttcaacactatttttggggaaaccaactaattacccggacttacccggtctttagcacctatatttattttggagactctattttgggggaggaagactcttttccttccgccaatcatccctcgaaaattatttcttcaactatttttagtcggaaacacaaacgttagccttgatattaaagtgaaaagtgtcgtaaatttcaaggtgaaataaaaagtaattgtatacttatatgcaatctgaatatattagtgcttatgtattttccaagtagagacattcgaaatgctccatttcacttaacatttgcattca
PCR verification status
Line verified as correct.