Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT41033 chr3R 9267522–9269708 (2186 bp) CR42756, yrt activityactivityactivityactivityactivityactivity
active
salivary gland, posterior endoderm anlage, anterior ventral nerve cord subset VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10posterior endoderm anlage3
11-12amnioserosa1
13-14amnioserosa1
15-16salivary gland4
15-16anterior ventral nerve cord subset2
15-16posterior ventral nerve cord subset2

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0261814CR427562592bp downstream BDGP FlyBase
FBgn0004049yrt6819bp downstream BDGP FlyBase iFly
FBgn0038156CG143728790bp upstream BDGP FlyBase
FBgn0040554CR1702513711bp upstream BDGP FlyBase
FBgn0000046Act87E13712bp downstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

cgagcagtttttaggtgatggttggggtctggaggcgccataaagattaaacacaagtgtagtaacaaagattgttgcttttggcacccgtcagtccgccataaaacaagactctcaccctgttgagttcacatatcacgagtgtgaagttctttaaatatttgccgggtggcataaaatatttacaatgtgtagcatgtgtggcaattgtcagttgaaacggctgtaaacggaatataactttgttattgatttgccaattgtctggaaataaatttcgaaaatgggattgacattggtggtgtctaggaaatagtaaacgtatattgtcgacttaggttgccgatgggaagaaacgggaatgttaaggaagtatattagaattattagatactctttaatattttccagtacattttcctgcccaaatgtatattataagaatcaatcctcatttctgatccactgaattctgtgttttgccagcttaatcataattgattcaatttagcagctagccgtatgatgatggattggcttctccgaatgcaaaaattcaatctacaagtctcggcgccgcactcacatatttacgcaaatgaacgacttggacaggattaggggattgggagtgggaatgggaatgggaacgggaatgggagattggctggatcttggatggttccagtcaattacccgcatcgcatgcatctaaatcaaaggccacaaaggcaatcgaaatctcccgggcttagcagtccggaatccggagccattcctcacctgctgccgctgctgctcctatctggatgaaatttatagaaaccatttgtatttacgtacccaaacggcgatatgttggtatttgtgcatttgtgttcgcataaaagagtcgtatatttaaaatttgcatttcaacataaaattatttggggaagattttaatgacaaattatggccgcgtaaattatggtgctgggtgctggtgcttcacccttagccggcgtacctttctcctatttatatttatatttatatcgtaaaggcgctcatacagatacatcccacccacgtcgccaaaatggcaataaaaatatttcgctacagatcttattcagctttatttcgccatttttatttgttttcgtgttgtggagttatgtgtgtgtgtgtgggtcgtattagggggctgccccctgcccccagcccccagcctccacctcctcctcatcctcctgctcctggcattgctatatttgttttcttacccgacgctcttttttttttagacattttgcagcgttgttggcaaaaaagcgcttttatatgtatgcacgggtatgctctgtatctttccgcttgcctggcacttatcctgggggtcctgctggtcctggcttcgcaggatgccttcgtgcctccacggtttccactgttgccactgtttcctccgtttccatgaggaagccgggactccggccgtgctcaccttgcgatttgtttttaaaagccgctcagctgtggctcaaacaactttctgctgcctttgttaaaacaataaaattattattattgctccacatgttggaattcgaggacttaaaatgttgtttcgctcctgtccttttgcctcttcccatccatccatccatcccgccatccatccatccattccgaaaccctctgaaattgggtctatatctggctggcttccttttgccttataatcatcgttcatcattcgtgttggacccgagccttgggaatttgtcatgcaatttattccttttcttgcgccactttggcaacaattttatgtcatttgttgattgtgtaaatttcgcgtttagccggtgagccattccattcgaatcccttcgtcctcgtcctcgtcctcgaccacgtcctcatcgtcggtactcggattcgaaaggtgctaaaggattttatgttcggcctaaccgtggcttattcgcgtttttagtagtccggccagctacttatggtcgcgatgtcctctcccgactcttggctacataaaaaatgatttactatatggcgggtctccctttatgacaagtcgtaaattgcattttatgtcgcatggtggcgggcttttttgtctttccctcatcctccacatagtacagatccagaacttcagccagccaagagttcctccctttt

PCR verification status

Line verified as correct.

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