| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT41437 | chr3R 10032242–10034382 (2140 bp) | Dop1R1, CG9649 |
      active |
brain primordium subset, ventral ectoderm anlage, brain anlage subset | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | A-P semi-stripes dorsal | 1 |
| 4-6 | A-P semi-stripes ventral | 1 |
| 7-8 | ventral ectoderm anlage | 3 |
| 7-8 | procephalic ectoderm anlage | 2 |
| 9-10 | brain anlage subset | 3 |
| 9-10 | ventral nerve cord anlage subset | 3 |
| 11-12 | lateral epidermis primordium subset | 1 |
| 11-12 | brain primordium subset | 4 |
| 11-12 | ventral nerve cord primordium subset | 3 |
| 13-14 | ventral nerve cord subset | 1 |
| 13-14 | brain subset | 3 |
| 15-16 | brain subset | 2 |
Whole-slide images
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0011582 | Dop1R1 | overlapping | BDGP FlyBase iFly |
| FBgn0038211 | CG9649 | 8939bp upstream | BDGP FlyBase |
| FBgn0051326 | CG31326 | 11616bp upstream | BDGP FlyBase |
| FBgn0053109 | CG33109 | 14040bp upstream | BDGP FlyBase |
| FBgn0053329 | Sp212 | 15554bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
gcgtgactctgcgatattctccaccggagatggccagaaccattaaaaaaatgcccgtttccacttaatttaaggtaaactttaccaacatctttcatttaaaaattgaaagtgccccaatggaattactaaataaaaaattttagttgctgtcttttccacattctcaatgtatatttacacaatccaaatacaatatatatgtatatatttaaacaaaaaacatgcgaacgcgaaaaatccatgccacattttataccagtaatttgattcatgtatatttaaaacatttttttaattttaattaaccaaagcctattgttacacgtaatattctattctaaatcttttaagtgattttgaacaacgcaattatattttaaagaaggttaggtgtacattagactgttttcacaatttagaaaatttacttaaagcacatcccatttgagtcccaatgtttcattccataagctataagctttaatttagatgctttcaccgagcatcgggcaaagtgaaagcataaacacagcatctgccaagtgtgggctaaaagaaatttaaacagttggggaatgggaaaggataggaaaacagaaggaacaactgtgacaccagttactgcatttaattggcaataaaagtggacaacaaatgctcgcgatccgcgcttcgttccccggaggcttccataagtcaacaaggacctctgcctctgatccgcagttcccaggaaggaaaaaggatatgggtggtgggacgtgaaaaataccaggccagctagagtcgcacttgggtgctttggctttgtttgcagagttaaatggcaaaatgcgttgattaaacgtcaacacacatacacagacccacacacacacggagaacacctggaggccgtacaataataaggctcaaaacctgttggcaggacaacaaggtaaaaggtggcatttttgccaaccatccgactgtctgttctttgtctggccgtctgggtaggcggaagtagtgtgatttacaagtggaaaaggccgagccgacaggctgaataataaccgaatggtaccaaaggactcgtcgagtattccacactttacagtgtcatttgagcacttccgcctacggcaacacgagttgcaaggataacaaacatcagagccagtgccacatgacccagggcacagcatagttgttaattaagtgctctgtacaattactagaccgaaaactccttaacaatgctgaaggacctggggaaaacatagctgctatgcctcagtttcctattcagttcgacgagcatttctgtacgtataatgagattttcctgtcgaacatatagaaaatttgcaatttttacattgacaaaaaattgttgaagaaaatgaaaatgtactatattttgatgagtgtttagtacttatagggcaatattcttttgcaggctttcaataaaccttttttaattcccttcgttttcgttcagtgccatgataaattttcaatttccctgcactatgaacttcgaaagcccacggtttttggggcgcattgaaccccatttggttgggttgccagtaaaagccagtaaattcgctgcttcgtgctgtttagcatatatttaaattcttacaataaacaagaaatgctgtgggcgtctcttggcaggtcgcagtaagaaatcctcagacacaaggatgggattctcacgtagaagcgataattctagagcctagacagctgatttatgcgcccaacaaatatttgttctttgctttcgcaaactttcttcgagaactttaagttttgcttcagctaaacacagttgctgcctcgttatgcaatgtgaaaatggtggaggtgatgtggccaaggaacactcgagcagatgctaactgcagtgacaatttcgagactcggatatctctcatctgttggccattgtctggactgtcaatgcccgtcgaggattgcaaggacctccgtgcagcaaaagaagttgaggaagttgctactgcagacagctgtcaacaggaatgctgatgtgcgtcgtacgtctttgggttctttgttgaaatttcggcttaattaaacgaagcagaaagtaaagaaagggggaaaactctcgcagacacatg
PCR verification status
Line verified as correct.