| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT41876 | chr3R 10863765–10866026 (2261 bp) | RpL10Aa, CR44944 |
      active |
head mesoderm AISN, head mesoderm anlage, trunk mesoderm AISN broad | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | trunk mesoderm AISN broad | 2 |
| 4-6 | head mesoderm AISN | 3 |
| 7-8 | head mesoderm anlage | 3 |
| 7-8 | trunk mesoderm anlage subset | 2 |
| 9-10 | trunk mesoderm anlage | 2 |
| 11-12 | ventral nerve cord primordium broad | 1 |
| 11-12 | visceral muscle primordium broad | 1 |
| 11-12 | longitudinal visceral mesoderm primordium | 2 |
| 13-14 | ventral nerve cord subset | 1 |
| 13-14 | ventral nerve cord broad | 1 |
| 13-14 | visceral muscle broad | 1 |
| 15-16 | ventral nerve cord subset | 2 |
| 15-16 | ubiquitous | 1 |
| 15-16 | brain subset | 2 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0038281 | RpL10Aa | overlapping | BDGP FlyBase |
| FBgn0266249 | CR44944 | 295bp upstream | BDGP FlyBase |
| FBgn0038282 | dpr9 | 18441bp upstream | BDGP FlyBase |
| FBgn0038280 | CG14861 | 22010bp downstream | BDGP FlyBase |
| FBgn0038285 | CG6974 | 40487bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
atcgttgggcgtacctcatcagctctattgaaagtttcctaatcgaaagtgtaaagagtagtgtctatttgtgtaaagtatgcgtgcaataaaatttcagtattattattgttttttttttcaaaaaatatattatcagttgataataaatttactcgttttaaagtagaattgcaatctaccacaattaagcccttttttcaaagcattttgtcaattttttgtttatctttttgtcttctccgctttttcctcaagtattcgacaaaatctcagtaagctgtgacataatttctttggcctcacatcccactctttatttggcttatgagcaatcccctttgttagcccaacgatatattataaatttcttttcgagtttttccgagatgtggaggggattggtctaagccaagccggggagataagacaagttcacggcacatgctgagcacgctaatcaggaagtcatttttattggggatccagcaaagaggcaacaaatgtgctgcgcttgacttgtccgcaataattatggctgtttgttgctgcgttgataagaacgtggaaataattacggcctaggcaaaaactttgatccggatgggaaaaccgccgccagattggcgcctaccatgaataaactgaaactaaataacaaattttaatatagattaaaaaatcaaaagtacagcaaacaatgtcgcttcaaattgcggaaatataacaattgtattggcatactgttaatttaactgattttaagtaagtttaagcaacattaagcatttttaatgaatattaattaaggttttctcatccgaaaggattcccaaactgtcccattatgttggtcattctcagctgaaacgaacttttggtatgcaagtcggatggaaaatgtgtcatcctgaaaagaagttgctaatttcttattcaaattaaatatgagcggctgctccagccttggagctcttggaaaacatatcggaaaactcaattacgaattcatttcgcttgtcaactttgacatccagacaaacaaagtcggagaaacagatatgtacgcacatctaggggatggcaaacgctgttactaatttcagcttgtaaacatattttaacaaagatgtcaacaacgtgtgatgcacacccacacccaaaaactgcgactgatgagggcacaacaattccatctggccaagtgatatatgtctttcatatagaaataccataaacaatgtcatttgacatgcaaatttatttatgaaaataacagacgcaggaaatacagaaacaaagcgttgcgaggaaacaaaaaatcacgcacacacgccccatggaaaatgagctgctgagctaaggaaaaaccatgcgacagcaaaggggaaaaccagaaagcggcaaaagattcaaggaaaaaccaaaaggctaaggaaacggcaagaaaaggaaattcaagcgtaaagcgaaagtaacttaagcagcggcaaactgggcaaataaagtgtgctgacgaatgggtggttgggttgttgggagtgtgttgggtaaggtcgttgagtgggagggcagtgggtggttgaacccggaccacaaggggcaagttacgccactcacccccaaccaacacacacacgcacatgctgaaaaattcaacagaatgtgccatggcagataattttttgtgtatcgatccccatctcaatctcatccccattgttttcctgtactgtcttaatatttcggtttaagggcattacaatttcctcagcgggcactggaagcaatccggattaacttccgggctttgtatataaaatataaaatataaatgattttatgtaactacaaaatttcttaatttaaaaagcatgtgttgtacaaaagagatccaataggaatgtgtctgaaatcatttccactgaagttaatatggtaccaagagcatctcatattctgcttagttccatccttagacatatgtctccttctgtttttcctgttgactcgggtcaaacaaggagggggtcgggtgtgagtaggggtcggggtcagaactctccagttgacccaactccgatatctttatgcttgatgcagacagccaggcgaaacaatatgtgtgcgcacaatattttgataagtgtaagcaaaaataaacattctctgcagagagaagaagactctggaaaaaatacagcaactaaaacacagacagaacccaaaacttggacgaaaaacaaatggaaagtcgagcca
PCR verification status
Line verified as correct.