| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT42327 | chr3R 11764233–11766405 (2172 bp) | Sap47, blp |
      active |
ventral nerve cord anlage subset, ventral nerve cord primordium subset, ventral nerve cord subset | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | trunk mesoderm AISN broad | 1 |
| 7-8 | trunk mesoderm anlage broad | 2 |
| 9-10 | ventral nerve cord anlage subset | 3 |
| 11-12 | brain primordium subset | 2 |
| 11-12 | ventral nerve cord primordium subset | 3 |
| 13-14 | ventral nerve cord subset | 3 |
| 13-14 | brain subset | 2 |
| 15-16 | ventral nerve cord subset | 2 |
| 15-16 | brain subset | 2 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0013334 | Sap47 | overlapping | BDGP FlyBase |
| FBgn0038387 | blp | 3572bp downstream | BDGP FlyBase |
| FBgn0038386 | CG5478 | 4778bp downstream | BDGP FlyBase |
| FBgn0038385 | CG4221 | 5625bp downstream | BDGP FlyBase |
| FBgn0085305 | CG34276 | 10934bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
cgtgtgcccttgcctttgttgctaaaattatgccaaaataaaatgaaaacaaatacgaagggaggcgtatgagtacgagtaactaactatttcatcttgcgcccaaattgcttggcaaacaagctggacaaagtaaaagtacgcaatgcattcctaacgccgcttgacacaatttactcaccaacaataacagctaactcttgattgctagccagttgggtcattcgggtcatcattaggcacacaaacaaaagttaagaattaaatatttgcacatgtcgcatggtcttggcctgattgaaatatgccctctatatgcaaataggtattacgagttctattcaaaatatataatataaatattacatttgagccagggtccaacgagcagtggaaatcaaagtccggccgagattttcctttttttccgctcacctggagacggcaaacataataaaatcaaagcaatggcctcaaaataaataaataaatgcgagactggcgaaatggaaaacccacagaaatttatcgagcgacatttggcctcctgaaccgaactgaaccgaactgaatacacacatttcccaaggatataaaaatataaataagagaaacgagacggtcggcgggaatccaattgaaatgctgccaagccgaatgcaaaaaaaaaccccacaggctacttaaatttaaaggcggtattaaaatttcatgtcaaggcaagagaccgccggacatatcgccatttgccaggacatggcgtgggtgctaacgacgccctgtgtccgagcgctcgccatttgacatttgccagccaaattaacgccctggcctggcaccaaaagcagccaaacaatccctgtggtcagcagctactcctcctccttctccactcgctgcaatttcagttcgtttcggcaggaccttaattgccgcctgcgccgtgggtggtgggtcctgtcctgaaactatttgttctgtgtattttttcagctgtcgcatttaattcaatttatacgacgctcgaatctttactgttgcggcattgtgtgcttattgtttgcaccacgaattaatatttatcgccctgggcatttgtttcgtgctaaatcattcggcccatataaatagtaatttttatgcaaattaagtgtttgtcacacgagtttttcactgcctaattgctggccagggagtttcccacgcccactcaaagaaaagggccgatttagaatgcgtgtcgcacggtagttttttcacattttgtttgttttttaattcccagaaagatttataattcattcggtaacccttttctatttttagtgatttttgatttaaacacatgttactcggaatctaaattccattttttgtgccacctattttatttatgaaaattctatttaatggcttggtatttctgcctagttgctaagttttcatgtacataattggctgcccagtacggctccactgctaatcagaggccatcaaagtgtccaatcagcttaacaccgatttttatagatccaccttttgaccccgacacgttggcgctgtccgtgccacttctgccacaccaattggcggtcaattatgccaaaaagcaatgtgggccaaaggtcttgccaaacggatttttatggtcctgcacgcaggagcaccgaaaccgaaataccgaaaaaataaaataaaatttaatgctcctcgtaaagtgaccccctaagttggccaaggtgcaaacgacgcagatgctcggcgtggtccgatttaaagcgcaatgaaatcaggacacggcaggaacatatggaaatataggaaaccgggtgggaaacatatgttagcagttggacttttgctccaataaagataaatggaatgtccgcaggatgggaaagtgcacgaccggaagtcaactaaagcgagtcgaggcaaggcagccggaaggccagtcactgctaaaagtttgtgtgccgtttgagcccttcacgataatgttgccatgttgccaagttgctgggcctgctccagacgcagacgatgataaagtcgcgttaagagccaagacaagcgctggcaaaacataaatattaacggagcgcggaagtgacaggccaaccgggtaatggcaacaaacgatgcaacagacgggggaggagccaggagccac
PCR verification status
Line verified as correct.