| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT42351 | chr3R 11814891–11816988 (2097 bp) | srp, CR44133 |
      active |
yolk, anterior endoderm anlage, posterior endoderm AISN | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | posterior endoderm AISN | 3 |
| 4-6 | yolk | 4 |
| 4-6 | anterior endoderm AISN | 3 |
| 7-8 | posterior endoderm anlage | 3 |
| 7-8 | anterior endoderm anlage | 4 |
| 9-10 | anterior midgut anlage | 3 |
| 9-10 | posterior midgut anlage | 3 |
| 9-10 | trunk mesoderm anlage | 2 |
| 11-12 | posterior midgut primordium | 3 |
| 11-12 | trunk mesoderm primordium | 3 |
| 13-14 | amnioserosa | 2 |
| 15-16 | amnioserosa | 2 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0003507 | srp | overlapping | BDGP FlyBase iFly |
| FBgn0264982 | CR44133 | overlapping | BDGP FlyBase |
| FBgn0022787 | Hel89B | 5719bp downstream | BDGP FlyBase |
| FBgn0262028 | CR42839 | 15152bp upstream | BDGP FlyBase |
| FBgn0002783 | mor | 16256bp downstream | BDGP FlyBase iFly |
UCSC snapshot
Sequence
aaaattatataacccaacaatggaagggacaatattttccctgacgttgtcagcgaaaacaaattcataattctgtttatttgcttggtccgagagcgaaaggatcttgaaggacatcgaagggatcgagggaaccaagtgagcacgagatgcggcaataacaataacaaccgcatcccctgggtgtcctgtctgttgtccgctgtccccttccccttgccacgatcgatttgtatcgtgtcggcgcgtgttgccattttgtcctgtttaccgtgccgcaggccactaactatccgcttacctggacgggtcacccgaaatgggaatcctacctgaacgggcaaatggcagccgtctgcggcttggccggccgattagcgctgatcattgcggcttaatcgtggcttcttgacagtttccaatactaactctatttaaataggttcaattgacgttttttgtttgtccggctgtgggaaaaaacttctctcaaatgtgcagaaaatatgttcggccagtccaggaaagtcagtcggggattgttccaagcaaagccgcttgaccatattacctaatgatgtgtttacttatttaattcaacgtcacatgcgccagtgttgattctacaaattggataagtatgccatgtaaattgtatttgcataaaattggaaaattactaagattgttaacactgacatgtgggcaacagaaaaatcttttttttcatatgtttgtataccaatggacactatcattgaaaaaacagtgtttttttagatattactaaaaactagtttaataattccttaaaatgttaattttaatccttgactttaagaaatctttgaacttaatttgatcaaatgtgacaaaatcgttagttttcccattcttgtatctccgcacagcatcggaagataacccgaaacaattgagtcgcttattgttgcattaaaagagtgttaaagacatgttctcaatggccattaaatgggtttgataagagcacaactttgtggcaggccgcaggccacttgaatcggatctggccggtttattgtaggagttttatttgaatgcctaccacataacgatgcagataattggcgcttaaggagtcaaacgacttgtatccaaaagataggcgaacactcagcactcaacaaagagctcttcatgaaatggatccgtggcgtattggattaccagcgcaatatttatggccgcgatgtacacgaaaatattaaaaatgcataaatacatcggcaccgagactatgaacgatcatcgtacatcgtcctgatatgtgagacactcgccacgcttgacacttgtttgaggggagtggagcggggaacctgccccgggtaacccattttcggccaccataaatatgtcaaaatagtttgaagccaaacttagtggcattaaaccctggatttcgtgagtacgtgtgcgtttcactttggtctcgtgggatatacaaataagaatgttctgtttgaattggacctcagtggatttactaatgtcccaatgtatcgtacaaaacttattaaacgacttttcgccataaacaatggctattcgataggtaacctccccccctccgccaacaaaaatcagagagctgtgccacggcccattgacaatcggagatcgagtgtgaaaaagggcacctcctagcccgcagacccacaagattatcctttcccaaggacttgtaataaatcacatcattagcatagcatctcctagtgatttatcgtttcgggagatcgctctggagcaagatcctcatgtttgttgacactgcacatgctcctccgaatcccccacacactcatctgaattgtccgatctgcggatcttttcgaagggcggggcactcagccctgactcacatttaaatgcgtagttcttcaccatagtctagtggctttaaggccgcctaccgttatttgcatgtgtactcaatgcatttcgtttatagaagcccgacttatcagacctaactaagcataacattgccagcttggggtcacaggcaaaagagggtcaaatcggatggggagctcggctaggtaaatactga
PCR verification status
Line verified as correct.