| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT42492 | chr3R 12076924–12079107 (2183 bp) | tara, bor |
      active |
procephalic ectoderm AISN, dorsal ectoderm anlage broad, amnioserosa anlage | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | procephalic ectoderm AISN | 4 |
| 4-6 | amnioserosa AISN | 3 |
| 7-8 | procephalic ectoderm anlage | 3 |
| 7-8 | anterior endoderm anlage | 3 |
| 7-8 | dorsal ectoderm anlage broad | 4 |
| 7-8 | amnioserosa anlage | 4 |
| 9-10 | head subset | 3 |
| 9-10 | head epidermis lateral anlage | 4 |
| 9-10 | amnioserosa anlage | 4 |
| 9-10 | head epidermis ventral anlage | 3 |
| 11-12 | antenno-maxillary-labial complex | 4 |
| 11-12 | head subset | 4 |
| 11-12 | ventral midline | 2 |
| 11-12 | amnioserosa | 2 |
| 11-12 | head epidermis lateral primordium subset | 4 |
| 13-14 | antenno-maxillary-labial complex | 3 |
| 13-14 | head subset | 3 |
| 13-14 | ventral midline | 2 |
| 13-14 | head epidermis lateral broad | 3 |
| 15-16 | antenno-maxillary-labial complex | 2 |
| 15-16 | brain subset | 2 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0040071 | tara | overlapping | BDGP FlyBase |
| FBgn0040237 | bor | 10153bp upstream | BDGP FlyBase |
| FBgn0020407 | asun | 13069bp upstream | BDGP FlyBase |
| FBgn0020399 | Mst89B | 15810bp upstream | BDGP FlyBase |
| FBgn0261286 | Mat89Ba | 17127bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
caaaggaggttcccaacagcatacaggtattgctcagactacttcttattagcagggctatcaatcgaccaacaggttgatttcctggcaatttcattcccatttcgagtcgccccgctacttggcaatggttcaatcacagtcgaattcgtccttaaagtctcgacagtcggaatgacatattgatggatcgcttgggatggtcaggtagaaagtgagtgcagcaatcctagaaaaccgaaattgagcccgaactcactggcgtgtctaatgcgctgcatccttttcggggattatggttctcgaccttaggtagaaatgctctcccgacccttcggcggcttacaatggaatgggatgatatgggttggttggatggttggtattgggatttgtaagggtctcgactcacgtttcacgaaagcctcactctgccgtacacatctcgcaaacagctgagttgcctttgccggaaaggaggcgaggttgggaggtatggttcattgaccaaaagttaccattcttaacccccacttccccccacttggcctcctctcgtatgggtaatgtatgctgtcagctgttcccccatttcgcaaaatcacaaacaccatacacattcacgtacgcaaagtgggaagagcgagagatgccttgcaaattttcaatgtcaccaattgcgatgctaacttcgctgccggcgtcgctgcttataaatcttcgacatgaagcgcaacaaaaagccgcaaaaaaagaaggcagaaacagcaagcggcgcgcattgaaaattgctctaattcgccaaaaacagctgatttggtcgacgacgccgccgtcgcggtggcttcctgtctccgtcgcgaccgctgcctccgcctctgctgccaatcgacgtccccacatcgacacggggactcggactcgcactcgaaactcgtatcggaatcggaatcggaatcgggggttttgtgtctgtcagtcgtgcggcgaactccgtggtgcggcaacatgaaatggccgacgcaaaatatgcgcacatcaaaaaagtctgcctcatacaacgcaacccacaaactccccaccaccccaaaaaccatagcccaaccatagatagctcgagcacagccttgattcatgtttgggtaaacagtcttacatctatggagtggaccaaccattttacaaatattcattgatacagttaaattgtagtccaaaatatttgttagaataaagtatttttatatattttcgtaagcataactctactctctggatcttaggtaaaaatatgaaaagcttttactgattttttttaaattcttctgaacttttagttgtatagttgatataaactttaacattacaaatgctatacctccgattgtgcaagttcaacgttagtgggaaagccgggctcgaaaatctttccgttcccacatcgtcatgtgccgctataagcaaatagctcgcccgctctgttattgttgtgggtgtttgcattcaaagttttcaccatgagggagggaaaaataaccaagccagcatgggaaactccgagggactagccaccatatcggcgtcatcttgagcttcccatccacatccagatccacatccaccaacatatgaaactaggagagctgtgcccgctgtgtaagaagagtgggagagcgggtggtgcgtcttcgcccatgtcttcaattcaattcatttttattatgatgagctgaagaccgctcggccgctgcgttttcgtcttcttcttatccaacttcgttgaaccccagcttgctggtaattttttttattatgccccatcgtcgttgtcttcgggccggagcgctcttttttatgtttccaaagtttcttcttcctctatggctcgtacacctaaattgctttggtggagatcgcggcttaaacccaaacccagctcgaaagccgaaactcgacttttttttttgcttctacttgttatttttttctcttgacgttgttttttatgtgcggctctcggctcgactcgaaccgactcgattcgcagctatcgcacgttgtgccgtgcgccccagccgaagaattcaatgtggggccccagaccagagcaccagacccagactcgctccgaccgtagtggatcgggccagagccacagtcgtagccagacccaaagccaaagcc
PCR verification status
Line verified as correct.