Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT42749 chr3R 12530048–12532179 (2131 bp) Ubx, bxd activityactivityactivityactivityactivityactivity
active
anterior ventral nerve cord broad, brain broad, ventral nerve cord broad VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10not active0
11-12not active0
13-14anterior ventral nerve cord broad2
15-16brain broad1
15-16ventral nerve cord broad1
15-16anterior ventral nerve cord broad2

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0003944Ubxoverlapping BDGP FlyBase iFly
FBgn0020556bxd37799bp upstream BDGP FlyBase iFly
FBgn0063261CG3127546406bp upstream BDGP FlyBase
FBgn0051217modSP48665bp downstream BDGP FlyBase
FBgn0038455CG1490752008bp downstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

gggatggccgacagatggctcgtcgttcttaaccctctaaataccgctgcccaggcacttagaaaaaattggcaccttgtctatactcaaaaaaaaaaagcatcgaacaaatattttaccacagcaataatataaatggtttgcaattaaaaaacgtaattttttttaaataaagggttaattcgttcatcgccttatcttcccagatacccaaaagttgtttaagtgtgtttgtatgtttgtagcgacggccaagccttagaagctcattttggttttttgggcttccaacacgcacaacagcgtcatcatcagcagtttgcgaggcaagcggggctcaacatgcgtatcaccataccaataagaaaaaacagaaatcgcatatatccgccgacgctgaaagtttatttatgagttcgctgaggtggaacacgcatatagcattggtaatgggttatcttattgtttataaagatttaggaactgtcacaagttgctgacaattaataaaaatctttaaaattgtatattcatttaatacagttagctaggaaattttcaaaatattgtcatatatatttatttatatatatattttttttttataaatatcaaaaattctttacgatcgttagttgcttcaaatattttataatatgtggaatttgattatatactatatgtaagagttagggaactcgctggttcctaatatgatatactcttggtgggaaatactaaaaaaaataatcattggccgcacctctcttgggggtttcacctatggggcttcgattcgaagtcaccgaaaggcacaaaaacgtaatggcaattatgattaataaaatatggtagattatagacttgagactctttgggaaatgtcaagagcccaaaatggatgcagagaaaagaaggtcaccgactattaactcggtgattttcgcaagtgtacaagttagtgggtgttaccctgcaaatgtgtgtgtgtgtgcatttgaaggcacaatgataaatgtacaaagcaaaaggcaaagaaaaaatagaaattgggtgaataaatagcacagattccgttgagcaagcagaaaaaaaggaactcgaggagaaagccggcgcaaggcaagtggaaacaaacaaaaatttcgccgtcggcgaatgcgaaaaggacaaatggctaaaagcgcgagagcagagcatagaaggcccagaaaccagaacccggagagcaataaaaccaacaaactccgagtagaaagccatttatcaactgcgaaaggaattcggtgcggaaggccaaaaacccagtttttgttctgggaaaagctggggaaatggaaatgcgagcaaacacacggtcaagatgcgagtaaaattaaatggacttttcagatcacggcttttaatacatcgagctataatgtgcattaaagctataatgctataatgagcattacttttatttgcccttttaaatatacttttagtttgaaacaacaatagtaaaacataggaatgcaactcaaacttaagtatgtttttcattaaaaaatattgatttgaagtatactaagttctagaaaaaattcctaaactccattgtaaatattcgacattcctatgcagtcgcatgaactcgacgcaaaggctgaccgaattcgaaaccaccctagccgcacgcaatggaaataaaaaactatctgccttaggccagcgacataaataaataatatttcttatttttttgcctgtttctgtcgcgttgtgtatcctaatgtgtttgggtggcgggcggcgaaacaaggataacatgactgattatgtaagcgaaaggaaacgcagtgagcccaaacaaaagcgtacaggcaagcacatttgggtcctgtatcttttggcattttccgggctttttttttggttgtttgccacagcaggttgaacgccagtggcaaatacgcacacacccacttattgtgctatgcgtgtttttgagaaagtggcacaatttttactttacgaacgcctaatgtaataaagcccgccctcccaaaagctggatcccaggatttccacaaatggatggcctgcgtttagcattcgcagcgataaaaccgaaggagcagcatcagaag

PCR verification status

Line verified as correct.

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