| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT42751 | chr3R 12533529–12535676 (2147 bp) | Ubx, bxd |
      active |
amnioserosa anlage, amnioserosa, midgut chamber | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | not active | 0 |
| 9-10 | amnioserosa anlage | 4 |
| 11-12 | amnioserosa | 3 |
| 13-14 | ventral nerve cord subset | 1 |
| 13-14 | amnioserosa | 2 |
| 13-14 | midgut interstitial cell | 2 |
| 13-14 | midgut subset | 2 |
| 15-16 | ventral nerve cord subset | 2 |
| 15-16 | epipharynx | 2 |
| 15-16 | midgut chamber | 3 |
| 15-16 | midgut interstitial cell | 2 |
Whole-slide images
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0003944 | Ubx | overlapping | BDGP FlyBase iFly |
| FBgn0020556 | bxd | 34318bp upstream | BDGP FlyBase iFly |
| FBgn0063261 | CG31275 | 42925bp upstream | BDGP FlyBase |
| FBgn0051217 | modSP | 52146bp downstream | BDGP FlyBase |
| FBgn0038455 | CG14907 | 55489bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
ttgttgcagttggaatttgtccccatctcagagtttacctgccccgctcacctggtgtcagtgtcagaagtcaagcgaactgataattgcaatggaacgaagtggatcgaaataccggaaatgacaaagggaaaactttctgtttgtcatgaggcaagtaattggtgtgggataagcaaacccaaagtaaaagtatttccaacctgccgaattacgttcaccaaatggaacagttcataggcggattgggggccagaattttccaattgcttcgtttcatgtttatccgcgaagtggcgccaaagtttatcaacaattcaacaaattaagatactttattgcacattattatgttattattgtgaattgcgtgccatttgctttcgtttcgtgagggggagggagaagagggcgccgacgcgtcgatcttgtcgagacattaagacatttgctccattcatgttccccccggttataaatagaccccgcccgaatgataatgaagcctactccaaagtgtgtgcaaacatctggccaacaaaacgatcaaagccgcacacatcggggaatttacatatctcggtaacaaatcttgtatatttacttagttactgggaataaaaatgtatcttttataacaatttacaatataattgatctaattgatgggaatttgtatggatatcttaatcagagcaattgaggatctacaaaggtggttattatgattttaaattgtaattgattataaaataaaaactgaggagaaagaaaatctatctacggaacatgaatctttaattattatatattaatatatcttctataacaagtgtcctaatttaatgcggctgacttgtaaaattagtaatttatcctgtgtaataaataactaaaatatatccaacatctattagctctcatttataaacgtaaacatccttagtgcccacactctgcaacatctgccttgaactggtctaatggattatatccttaaatggctgacaacaaccgctccagaaactcctccctccgaaactcagacggaaacattatccagacaaagaagcattattgtaatcgattggattttattctattagcgtcggcataatatacatttggcccctcaaaaaacagccaccaattttccctatatgacaaaaaataagtcaggaaaatgtggagtgggacacagagagagtggaaaaccgcattcgtaggaatacatttcccgccatagactttattaattttctaatggattttacgttttctgcagttgaagatttcaacatttcagataaatatttatgcgtggggttgggttggctggtaggttggtaggttgggtagctatgaggatatagatacgaacttggaaacgtacttgttgttgccactgtcggcgacaggactctccgggctgtgtccctgtttttttatggacaggaattgattacgattggcaaatggcactcggtggaaggatgttttgtttatgtttgtgccggtaatttatgctattgtataaattgcccataaacatataggaaactgcagaggttgctggttggccgtctgtcgagtgtttggttaacataactaaaaacaggaattaacagcctttcgagtgcctaaacgggcaaagtaaattaaatgtgtgtttaattggctgtgcgggggaggtgccactgtactatactgtgtgactgctgcaccacagtgccacttggtctttcgtgccccggggcgattcttgtcaagtgcagcctgctgaaaaactgctaacaaaatgatacgctttgtaaaattcgcagtcaggcatcaccatttttctcgctgattttctttgcgtgccaagtgatacttttacccgattttcctcattgggcggtgggtggctttaattgcacaccaagagcaaggaaattgtgtctctgtgtgtgcagtgtttttggttgttacactggtatgtagtgtacatatgtgtgtgtgtgtgtgtgctttggcccgagttgacaaactgaataattggcaattattttgggcaaattttacgagctgataatttcacatattatatgtacagagttgcataacttattggaccaacacctatttttcgaggcatgcacatgctga
PCR verification status
Line verified as correct.