| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT42757 | chr3R 12544019–12546269 (2250 bp) | Ubx, bxd |
      active |
lateral epidermis anlage subset, lateral epidermis primordium subset, tracheal system primordium broad | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | ventral ectoderm anlage | 2 |
| 9-10 | head subset | 2 |
| 9-10 | lateral epidermis anlage subset | 4 |
| 11-12 | lateral epidermis primordium subset | 3 |
| 11-12 | tracheal system primordium broad | 3 |
| 13-14 | head epidermis subset | 3 |
| 13-14 | foregut | 2 |
| 13-14 | lateral epidermis broad | 2 |
| 15-16 | amnioserosa | 2 |
| 15-16 | midgut chamber | 1 |
| 15-16 | head epidermis subset | 3 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0003944 | Ubx | overlapping | BDGP FlyBase iFly |
| FBgn0020556 | bxd | 23828bp upstream | BDGP FlyBase iFly |
| FBgn0063261 | CG31275 | 32435bp upstream | BDGP FlyBase |
| FBgn0084245 | tre-3 | 45072bp upstream | BDGP FlyBase iFly |
| FBgn0084688 | tre-2 | 45387bp upstream | BDGP FlyBase iFly |
UCSC snapshot
Sequence
ggcccaaaaggggtaaaaggagtaaagagagcggctcggagcgaaggcctgccaagtgacacatgaaaacgaaacgaaaatgacagcggcaagtgacacttggccggcagcagtaacagcagctcagaggatcgccatggcggtgggcaggggctcaatctgaccattgtaatttcatttgtaattagctgaatgctgtacgcgagcgatccgctgagtgtcgcatggcacagtgggccaaaaatgccgggggcaatgccaaaaatataaaaggaacagaacaaaaaaatcgagggagcctggtgcgacattttggtgcgccgaatgccatattttatttccattgccaaaagtgtcatgttacaaagatttatgggcgctgtcagtatgccgtctctctctgctgctctctatctatccctctctccctctctcgctcctcaatccagctcacgcccaaaaatttggtcatgttttgtgtttgtgtcacagacacaacacaacaaacttgcgcataaatacctaaaaatactctgaccaattccaaatgcatcgagtgcgataaacagggcccaaaatacttggcatacgacttttggccagttatcagtttcagtttggatcggtgatttactgccgaaagtattcacaaaacagaaaactacctgttctattgatctgaggccctaacagaccctaactttctcttccatcctctagttcgaatgtttgggctgctcaggtgtcaatacactcgccaccggcagccgcagaggcgtcttggtctcctactcgaatccaatcccaacctatccgataccatcccatccaatccaatccgttccactcccccttcttcctgaccaaaaacccaactgacaatgacatatttggctggcactttcatcgcacgtccatgttaatatgctcaagatttatggccccagctgacaaaggaaatggcattctggctcaattgtcgttgctgttgttgtgcacatccattttgttgctgcagcggaaagttgcataatttttatggacactcgttaatagatcatcgattgagattacagggaaacgctcgattctggttcggtcctactgcggtgggtctgtctccctacaaatttctcatgaaatcgggggaacgtgattttgttgtcagttcggtttggattggtaaaagggtggggcgggattggtatatatccagtaaaacaagacagcagtaaaaacaaattaaaactgttcctgttaatttgaaaatatatatgctgaatatattttatcaaatttcctaaccaacgtttgaaaataaaatattttaattttaaagcggcatcataattttttataacttcggatatcttacaaaagctaacatctataagatataacacccatacaggtaaatccaaccaagtctcttatctgagatttcctaacgactccagataatcttaactggtataacaatcttctttgcctcactaaccttggtctaatcagaagaattatctcacctctgcggactcccattgacagctgcgaatatcgtaaacggtctacgattacctgtattgttccaattcgaataaaggtgagattgagattcatttcgccgagagcagataaatttactcccaaagcaaccactaaaccggctgagcgaaatgatgatcgatcaccaggtgagcgaaagagaggagccagataaatagagagaacgcgcacagagagcagatgaataagaagccgagagaaagaacgatcgcatacctgtgcagtgagcaagcaacttattctgtgaatcaggtgaagatcactgaagatttccagccatctgacatttccaaaatgggttcacgcacgcacaccagcacacttgttcctatgggcgatcagtcacttgtttctatgagcgatcaccaccaggttcatttcatttgcccaacggtcgcggacattgtcatgacgtttgctcttttttcgggtctgcgcgatcagctgatcatgatggccgccaaaagcaggttttcagctcaaccgagcattattaatcataagccgaaagagagggcacctccaacagagtgagtgggaaagacaacaaacgcttttcaaataccacaaaatttatggcttgaagccaagccgacggcaagcagtccgcgacatgcacaaaagtcatttatttcgcggactctgctttttgacctagaaaatcatcggtagtcgctgcgattcc
PCR verification status
Line verified as correct.