Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT42808 chr3R 12668327–12670488 (2161 bp) iab-8, iab-4 activityactivityactivityactivityactivityactivity
active
trunk epidermis subset, dorsal epidermis primordium subset, esophagus primordium VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10not active0
11-12dorsal epidermis primordium subset3
11-12esophagus primordium3
13-14trunk epidermis subset4
13-14esophagus3
15-16ventral nerve cord subset1

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0264857iab-8overlapping BDGP FlyBase
FBgn0020546iab-47399bp upstream BDGP FlyBase iFly
FBgn0000014abd-A12557bp downstream BDGP FlyBase iFly
FBgn0262290mir-iab-813670bp upstream BDGP FlyBase
FBgn0262462mir-iab-413670bp upstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

cattggaaacaaggtgcgggattggagctcatcggatatttttttaataaaccataaaaacgtttctaaagtgtcacactcaaaatttgggctgtcacataaatatcaatgccttaaaacaaattccagcgattaaaatctgaaaatggacaacaacaaaaatttgaccacctagcgcattagaggctcgattgaaaaacccgaaattaaaacccagtctcgagactgagtggtcgtctgtgagttcgtatctatgggatacagataccagtcggattacattaggcaacacttggggctcgaagatacggagaacgaaaatcattttagaataacaaacccagaaagccaacacaactcggtggcccttttgcgtcagagaaaacaaagaaaacgctgttcaaatttacattccattccgaaagagtttctggaatggatttggggatagccgaatctccctgttgacttaggcggctcccggttccattcgctccccggctcaaacaatattttgcatattccatcgatttttcgactccgaaaaacgagtgcgcataatgagcgtgcaagagagatggcttagcgcagagagagagagatggcatttaactgggtgtgtctccaccgagaaaaatagatggagatacggaggataccaaatagaaggaagtttgtcgccaaagaggataatttagtatcgattccacatcatatccatgtctccgccgcaatttcaagtcgcttttctagcaaatctaagttcccggcgcataaatctcgttaatttatgaaagatgcgtgcgaaatgccaacaaactaactcgccaacgcccacgatcacaaccgcaccacccaccgcaaccactctgcaccactacaccctgcaccgcaaccacttcgactgtcacgcgagtagctgttctgcatatcaaaccgaaactcgagaatgccacaatgcgactgcactgggaaaaaatgggcttagacttcctctatagaagaaataaataatttttgagtttaatttagtacacattatgctactcatattttcacttttaagctttttaaaaacaaattgccttcggtttttcgagcatgcatgcgaagtattttcataatttcctatgtaatttatttgatttataatgcacttgtagctttttaaacttgttgttattggattgagattcaaagttttctgtgtatgggagtgcaagtccgcttccaggtctgagtcaaaatccaagtgccgggccatggtttggacccaagttcgtttggctcttgtctcgctgacatctttcgatttatttaactgtccatttctgtcgcacttcgactaacgattttctagtcaagtctgcgttcggtgggcaaatttatttgccttgcccgacattccaacgttcaactgtacgagggggaaaatttatgcaaatatctggcatattgatactgttatgcttttgtaatggaaatacctgcaattaccacttgaagttctattgtgtagtggcgctgtgaagagcaattaacgcaaattagttttcctcttcgaggaaaactaaacaaaacaccttagggaaaataagtttattttttgtgttgaagcataggcaagtggtttaattatttaaaaggagaaatttattactcgttagagataggtaattttgaattttggttgctttatgagtcagacaaatattgttttaaatttctaaaactttcttaatttactaacagtaggcatttcagactcttaaaggtattggcacatatatataaaatttaatcagatatgtatgtttcacaatgcaaaatgaaatatttcataatctaagatcacattaaatagcactttacgacaaatatgtgacaatatattgcaaacggctggattgtagaataaataactcaaaaatcataatttcttgctgttcttgcatctacagaccccattatcatcattatttttctgttcggctctaaagtaaataataacactgtaattacggagagtaatgagctcatatgcgggtgcaaaagtcattgattacttataatgggcgattattatttatatagatgggtgtttttgtgcttttctctctacaaaagtgagatactaccagagactacgatcccaacgctgt

PCR verification status

Line verified as correct.

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