Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT42811 chr3R 12673667–12675768 (2101 bp) iab-8, iab-4 activityactivityactivityactivityactivityactivity
active
brain primordium broad, ventral nerve cord primordium broad, brain broad VDRC

Annotations

stageannotation termintensity
4-6A-P stripes3
4-6posterior3
4-6pair rule3
7-8posterior endoderm anlage3
7-8procephalic ectoderm anlage3
7-8posterior3
9-10brain anlage broad3
9-10ventral nerve cord anlage broad3
11-12brain primordium broad4
11-12ventral nerve cord primordium broad4
13-14brain broad4
13-14ventral nerve cord broad4
15-16brain broad3
15-16ventral nerve cord broad3

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0264857iab-8overlapping BDGP FlyBase
FBgn0020546iab-42059bp upstream BDGP FlyBase iFly
FBgn0262290mir-iab-88330bp upstream BDGP FlyBase
FBgn0262462mir-iab-48330bp upstream BDGP FlyBase
FBgn0000014abd-A17897bp downstream BDGP FlyBase iFly

UCSC snapshot

UCSC snapshot

Sequence

ttgcttttgttgctgcattgcctttagttgataagtttgctgctactctgctgagatggcctttgtgtcttgcttattattgtttctgctgctctgctctttgtgaagttgcttttgtataaatgcttatatcggtattgctactgtatgaggcagtataatattttttgttttggtcatactatggttgatattctttttcagactggtatttctcccgttcatgataattgctaattattttatggaagctagtatatgctgcgactgctagctgtctgtgtttcctgtttcttctttaaactttgctatcctttaagctgtcttgactttaatatttgttgcggttgcagctgtgtctggtcctgtcgtttttgaatctgttatcaattcgaatgtttggggagcgtgcaaggctcttaacttgaagcttggcaatttccagttgattggctgcgcttctcgagattttcgatatatcaagacgagggaatttgcatgcagaaaatgatgctttctgccagccaggatacttacgaccaagaggaaccaggagcagctgcagctcggccatctccatcagttggccttatggtgcaaatggccgggcttggcgatgcgaaaagtgaaaatgcagtttcgcataatttgatccctccccaaccccctggcatattgctctctgttgctgctgctgatagttctgggtgctgcgtcccggtactgagtccttcatcctgccgtctggtggcaagacaatgccagttctaatcgtaatcatggttgcaatgtaatggcaaaatgccaagagccttcctccgctgcgctcacctctctcatttctgcttcggtggttgtccttcgctggaattgcactttttatggcattgcaattaggggtaagcgcatcgatgcacacacacagatacagtcagatagcgaggtaagggtgcaagggctgcgcacagctaagggttgttaattatctactgagaggtgaacagcaggcacccataccaaggcaacaattatctgagagttctttactgcaacttcccagaatggcaaacaaatagtttttgacataacttgggcgcaacgttattatatggtaggatatagaatgaacttattaaagagtttaccaaatctttaaggattcttttgacagtgtttcatgaagagtattcatactaattaagtgtttttgagcgcataccaaatatgatacaaatgcttataactaaagatacatgaccacgatattttcaaattcgcggcttaaagcaaataaaataacaaaaaaaatcagtatttgtataatattttaagaactttagatttcatctcattcgagttaaactcattgttgggctggtttccaaaattctgtgaacaagaatttttaatataagtcaagtgccgaagtgtgttatcaacaaacaatttatgaaatgggaaaacccacaataaaatccccagggccaattctgatccaagtcagagtcgaatgcaaaggtgaaggggcatggttgggacgggggaatggggtcgattggtccactgtcgttgtatttgcgcattgtgcaggaaagtcataaaaatttctgctgtctacgttcgaaatgaatggggagaaatgagaaaaggccgccacgctgttggcttttcttcttattttccggggcagaccggcgaggagttcttgtaaagtttacgagcgcaaatataattcaaatggtcgttaattgcaacaacagcgaaagaggctcataaatggattgaatacccgcttggggaagtgggcggggttatatacttacaacctcccccaccattcagcaacaacataaagctaaggcagctgggactggagagcttttttgcagccggaaaagcacaaaagcaaaacaaaggcccaagcacgtggtggggatatttcgatggctatatttcgaaatttcccgatttcgattcatcaagcgttactctggcttggcctaaaagtaccaaagaggttagattttcgactgggcgtgtttgtgtgtgcgccccagggaaatttcgaagcacgtgcgtgtgagttgcgcatgaacggtaca

PCR verification status

Line verified as correct.

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