| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT42849 | chr3R 12747382–12749489 (2107 bp) | iab-8, Abd-B |
      active |
hindgut AISN, hindgut anlage, brain primordium broad | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | hindgut AISN | 4 |
| 7-8 | hindgut anlage | 4 |
| 9-10 | brain anlage subset | 2 |
| 9-10 | ventral nerve cord anlage subset | 2 |
| 9-10 | hindgut anlage | 4 |
| 11-12 | brain primordium broad | 3 |
| 11-12 | ventral nerve cord primordium broad | 3 |
| 13-14 | brain broad | 3 |
| 13-14 | ventral nerve cord broad | 3 |
| 15-16 | brain broad | 2 |
| 15-16 | ventral nerve cord broad | 2 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0264857 | iab-8 | overlapping | BDGP FlyBase |
| FBgn0000015 | Abd-B | 5550bp upstream | BDGP FlyBase iFly |
| FBgn0263595 | CR43617 | 23800bp downstream | BDGP FlyBase |
| FBgn0038458 | VhaM9.7-d | 53544bp upstream | BDGP FlyBase |
| FBgn0015008 | Actn3 | 54225bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
gatcttggccgcattttgcatcaccctcaccgcgggcctcttttcgcacttccataaatcattccgtccagcaatagaaccctttcaccgatttttacctgtctgacattcaaatgttttcattccggaaaatgtcagtaatatattcattcgagcgggcgtcctttctggagaaacacaaaatagtgatttctttccaaaccaaaatagcattgggagtaagaaagtgctttaataatacgtgacgcgtacagaaattaacacgttatgccgtttttatatgaaaattggttagttatttgttgttagtgacggtttggatatcacggtgctttggatgcggacaaaaattcaatataaaaggcccaaattaaagaataattcaaagttttgatagttttcagccagaaaagatcaatcgttgagatcaagactcaagtgttcagtacgcaatagttttttgacaacatataataacattgtcggaaaattaattaaaaacaaacgaattgaaagcgtcgtttcgttttctttcagtaggtttcaacataaaacgagttcctattcatttattttcaaaaatatataaatattggaagcctccgcttccctttatgttttcacttcaatttttcagaaattgtttaacgaaatgaaaaaattacaaattgggtttactgctacaccattcggatagccttagcagttttaaaacatttcgtaaggcccaatatgtgtatttaaaaggtggtttagttctagctctagcttatttctacttaccggagacataataagtaaggagctcttcaattagcaaactttgaggcggtttccgttcctccggtgggccgaggactatgctctagtatacatattttagcagcaccataattcagggccgctatttacgtctcgtgtgtcagaagcggaggccacaaatcactttaattgaagtcacgccccgcaaactcaagggagccggtccaaaagctacaccactgtcccttcagctgccaaaccgcaaggcggaaatgctggtaaatacatttttgtccaggcttttcatatccaatatttttctcaagtcgcacacgcgaatttgtaatccacattcacaattggccaaccgaacgcgcgcggatgcggattcgaatgcggatgcggacgcggggtcaaagtgcttgttctttgtcattattataattaattttggtatttttggcaacaaacgatgccgaaccggctctttttgatttacagccacttctttcattttctttatatactttgggtagacttctcgtatacttttgggttcccatctgcagcgtttttggcttttgttgtcggattggtgcacaattggtgcaacgccgccgccaccgaagacaaaggccgtggctccgggacccacagtcagacttcgaatgcgactccaggaactccaggagctccgcaggacaatgcccaccgaacggggagcaggacgagtggcagcaagtaatcgtcgtttgagctccgggcgacgcgacgtcgacctgatggcaaagtgtccaaaaaataatatttgctgttcactttgacacaaggcgcgcttgggttcgttccgttcgtttcggttgcagcgcagtcgacgcagatacagatatatagatacatagatacaaatataccgaggtggttgtcgaggagatgccggcgaggttgtgaggctctgaggatgcgaggtgagcatggcacaaaaacagagaactcagaactgagcatcgaaaacagaaaactgagaatcgagcatcgagcaacgagcaacgatagaccccagaagggcaaaagtgggaaggaaagaacgccaaccagaaggtcgtaaacccgggcagcgctgccacgatggcaacacttgcgagaacgccaaggaaatgagaatgagaatgccgagcgaagacccaatgccaaaagatgaaacgccaagagaagcggcggcaaaaggcaacgcggtggatcataaaacgcgcgtgtatctttcctctctttcgtccgcagtagccccgtctcactcgctccacggacacaaacccggtgaaaacaaccacccgagaatccgacac
PCR verification status
Line verified as correct.