| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT4320 | chr2L 8578321–8580523 (2202 bp) | Sema-1a, tRNA:CR31895 |
      active |
telson subset, posterior spiracle, esophagus | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | not active | 0 |
| 9-10 | head epidermis lateral anlage | 3 |
| 11-12 | antenno-maxillary-labial complex | 3 |
| 11-12 | ventral nerve cord primordium subset | 1 |
| 11-12 | posterior spiracle specific anlage | 4 |
| 11-12 | head epidermis lateral primordium subset | 3 |
| 11-12 | telson | 4 |
| 13-14 | antenno-maxillary-labial complex | 3 |
| 13-14 | head subset | 3 |
| 13-14 | lateral epidermis subset | 3 |
| 13-14 | ventral epidermis subset | 3 |
| 13-14 | epipharynx | 3 |
| 13-14 | telson subset | 5 |
| 13-14 | proventriculus | 3 |
| 13-14 | posterior spiracle | 5 |
| 13-14 | hypopharynx | 3 |
| 13-14 | clypeolabrum | 4 |
| 15-16 | ventral epidermis subset | 3 |
| 15-16 | trunk epidermis subset | 1 |
| 15-16 | dorsal epidermis subset | 3 |
| 15-16 | posterior spiracle | 5 |
| 15-16 | esophagus | 5 |
Whole-slide images
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0011259 | Sema-1a | overlapping | BDGP FlyBase iFly |
| FBgn0051895 | tRNA:CR31895 | 7362bp downstream | BDGP FlyBase |
| FBgn0264437 | CR43855 | 12049bp upstream | BDGP FlyBase |
| FBgn0051603 | tRNA:CR31603 | 36490bp downstream | BDGP FlyBase |
| FBgn0051604 | tRNA:CR31604 | 36699bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
atctgaagtttatcgccccgcacattgaccgctcgtaaatttcatagaattaattactgcatctgttggctggcattgttcttgttgtcattattattattgctattattgttattattgtttaacaggcatttgtttgtgtttgtgttggtggggcccttttaatttctgcgcccaacttaatgatccatgaattactggatcgtgggcgggtccaattccaattcgaattcccaagggtcgaggtcacaattgctatatgctgcatgtcattcccgttctgcggttcaatgactgatgtggccgtgtctgttcgatgttaacaattgatttcttacctctttgtcgaactcgttgagaaaaagggcaacgtatgtatgtagtatactcgtaattactgctgacatctgtgagtacctgacctgtctgggccttggtaaatgattcggtttacgagttccttgggcatctttaattggatgcccgtgagtgggagatctatttaattgttctgggacagggattgatttaaaaggttttctttttatttcatttggattatttggttctcgaaatggatacgcatcttacttaaggggattaagtactttaagcactttaaacagttcagtttaagctaataatgtgaaattttatagcttagtttccttagaagaacttaagatatcaatgctctcattagtatataaagctattaaactattgatgaagttgctaacatatgttctttctttatcgtttcaggtatgtaccctaaacacaaacgtccatagaagttaaaagcagtatgtagtctatgtggtctcttttgtacttcatatatatttagcattctcaactcaaggacttttttctatgaccccagcatttgggagtttaccttttgagttgtgcttcccgttttatatccacagcttagcaaattaaagtttggtgggatatttgatggcagcgtgaaagcttaaccttgccaacacagccccacccccggggattcattttcgcccattttttgctaagcgtctgaatgttgtcgccatttgcgttgaatgccacggcagcagcaacaatggtaacaaccgcgctgtgtaatagagtcggttagttgccaccctatatcacatatatacagatatatatatatatacaaacctatatatttatcgaaggacagctgagggggggtaggttgcttcccaccaaattggctccaggctgagtggggtgaattaagtcttttcagggagtagtcagcacacaacaatggaatgtcgtgctatctccctgctgcacaatgttagagttgcacttaacttcagacacaggaaagccgagctgcacaataagcacaaggacaagcggagagaagctaagcaggatgctgaatggtgaatggtgaatggtcaccctctccacttcattccactccactcgactgcacttctacccccccgcctccactgttttttttctcagtgtctttgggtgtgtgggcgtcctgacaaaaacaaaagtcacatgaaagttgcatgaaatagctgcagctttgctgttgctgccggcaaagtcaagtgcctggcgatttttcttacacaataatacacttttcccatttcgctgacagggctccactttaatatcctctagctaaatgtgcgaaaggtatgataattgtagtgcaaacccatggattttaatgtctcaacgttttacaattgtttaacaaagcagtgggagatttctgtttcaaataaaatataaaaaaatatcttttgataaatgcttagataacagatgaattataatatactataaacatatgatatgctaggtcatcaaaaagtctaataccgagcacacataaagttttcatttcatctgtaactcaactcagctgaaacatttcttgcacatgcagcctgtgacgtcacttagctcagacaactgtgataatgataaaattagattatagatgctttccatttttcacacccaactcgcagcagcagctctccccatttccagagtgcgagatcccgggttttcaatttatagttgcctcccatgtgggaattccatgcgggtgttgtgctggaaaataattaccatcaaagttttatattacacatatttattacgaggcgaatggaggagcttgaaggttgagtggtggtgaaaagca
PCR verification status
Line verified as correct.