| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT43394 | chr3R 13773672–13775780 (2108 bp) | cpo, Rim |
      active |
anterior midgut primordium, posterior midgut primordium, midgut broad | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | not active | 0 |
| 9-10 | not active | 0 |
| 11-12 | anterior midgut primordium | 3 |
| 11-12 | posterior midgut primordium | 3 |
| 13-14 | midgut broad | 3 |
| 15-16 | midgut chamber | 2 |
| 15-16 | foregut | 2 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0263995 | cpo | overlapping | BDGP FlyBase |
| FBgn0053547 | Rim | 31373bp downstream | BDGP FlyBase |
| FBgn0263399 | CG43445 | 35906bp downstream | BDGP FlyBase |
| FBgn0038558 | CG12347 | 40500bp downstream | BDGP FlyBase |
| FBgn0000477 | DNaseII | 71425bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
ctcttatcgtttcagttgccgtagaggaaacctcgcagtgggaaccaaagctgggaactttacttaatgcctcttagttgcgacgataaaaaactatataaataggcaaactctggccatgtacaaatacctatgtatatatccatatctaacgactatttccacgaattactcatgggtatagacttttagggtaatagttttggaatatgagtagaagagtttgtgaatgacctgggaacttctgggaataagacctcagttcagttcgagttcaatatatttttaactgactcataggaaaagcaatgaaaatatcttatgcagtacgttatgattagaagaatctgagtgcgaaatgttggaaataggcgctatgtatgtttttatgaactttagctgtcaattacaatgactttcaaccgaattgagtatcccgaaaatattccaaacagtagcgctcttttcaatctagaactgcaatcaaccaccttcaattaagttcaattaaaccgctgctactgtataggtagagaatcttatctaaagccaactttgtggtgtcgccttccgaatcataacacagcaccttatatagtacttatttctttccctagtttttccttttttttttttttttttgtcaatataccaataaccgattacactatgtgtgtcagaggcgaacggcttttgggtttttataacgttccttacttttatgagctcgagatattttccgtgattcgtcgtaatcagaacctcgcacttgacggcgcaatgaggtagatatcaaacaacgaaagtggttaacttttattaattgttgggtaattacgacagcagcagatatagaagatagcaaaggaaggtgatgggacggcgacgggggtgctgttggtgcaaaacttgtatcttggcccttgacttggtttgcctctcgagtggcgagttgccagcacctcgacctttcttcagtggttgcagctgaaaaacaatgaaaacgcgggaaagtagagcaagtatctgtgagacaaaggcttttggggttatagatcataataaagccaacatgcaagctcacggaattaaaagagagcgttgctgaaaaactgaaactgcttagctcagcttgtggaggaaacaacttggcgatacaaaaagtcaaacttaaaatagttttttaattatcgatgtcaattaaaatgaactgtatgtagattgtagttgttgttttcccagtcgctgtttactctatatgtatacatatttatatatatatatatatatataagtctatatagcagctgctcaaagcgaagcggagcaaggcaactaaaacaataagcccaaacgagagagtaagatatgtacatagcgttcacttgggggagaaaagcgaactttgggcaagtcatgcccatgcacagcgagaaatcagatcgttttatatggcgtttatcggtggcagccgagttctcgtttgagtggagcatcaattgcagctctaagataaaaaatattaaaatttaaatacgtataattaagcaagagtcaagattaagcaattagttctcttaggcggcagatcacgtagtgacgaagcgcacctgggcagtatgcatttaattgtaaacaatatattagggttttcattaagtgtgttagtgtaatagcagatattgaatcataatttgggatgcccactaatttctttgagtgcacacgacttgcatgcggtgtttcctctctttctcgcacggaatgccagaccagagacccagacctcccaataatatccgtcatgggtcgcctaacgagccccgcaataagtccaactgatcgatgattggaggggtgattatgttgggggagggagggggtagcgcatggcagtgggtagtgctggggaggggcatggggagtgttgtcagctgtcttcagcgagtttggagtcgaaagcaaagccaattccaacttatctatcgattgctgatggccaaatgctgtttgcgtacaatatcgacaaaagtgaggaccgaatcgtatacaaatataaatataaatatcatatatatcttggtataacgctgataacaagagccggca
PCR verification status
Line verified as correct.